Factsheet for HORVU6Hr1G077290.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G293100.1	Wheat	cytosol	87.03	97.06
TraesCS6A01G313700.1	Wheat	cytosol	86.59	97.04
TraesCS6B01G343800.1	Wheat	cytosol	86.37	96.32
HORVU7Hr1G036160.1	Barley	cytosol	66.37	79.47
Os02t0761100-01	Rice	cytosol	69.67	78.66
EES05845	Sorghum	cytosol	67.91	78.03
GSMUA_Achr8P23380_001	Banana	cytosol	64.18	75.65
PGSC0003DMT400066358	Potato	cytosol	59.12	74.31
VIT_03s0063g01030.t01	Wine grape	cytosol	58.9	74.24
GSMUA_Achr5P05580_001	Banana	cytosol	63.96	74.23
Solyc01g108340.2.1	Tomato	cytosol	58.68	73.76
KRH57738	Soybean	cytosol, nucleus	57.8	73.06
KRH71172	Soybean	cytosol	57.14	72.02
KRH50243	Soybean	cytosol	56.92	71.75
KRH04660	Soybean	cytosol, nucleus	56.26	71.11
AT2G15790.1	Thale cress	cytosol	53.85	67.87
Bra015237.1-P	Field mustard	cytosol	53.19	67.04
CDY36653	Canola	cytosol	53.19	67.04
CDX71247	Canola	cytosol	52.53	66.2
PGSC0003DMT400026079	Potato	cytosol	51.43	64.82
Solyc02g090480.2.1	Tomato	cytosol	50.33	63.43
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	22.64	54.5
HORVU4Hr1G000910.3	Barley	cytosol	22.86	52.26
HORVU6Hr1G012570.2	Barley	cytosol	23.52	51.94
HORVU7Hr1G095720.2	Barley	mitochondrion	23.08	48.17
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	22.64	47.69
HORVU5Hr1G111410.1	Barley	plastid	20.66	47.47
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	21.54	45.37
HORVU3Hr1G030750.1	Barley	plastid	21.76	41.25
HORVU1Hr1G000710.1	Barley	mitochondrion, plastid	23.3	37.72
HORVU2Hr1G056230.1	Barley	nucleus	28.57	20.97
HORVU6Hr1G037500.21	Barley	nucleus	26.37	14.58

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A287USJ8	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G077290	EnsemblPlants:HORVU6Hr1G077290.1	InterPro:IPR002130
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029000	PFAM:PF00160	PFAM:PF00515
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50005	PFscan:PS50072	PFscan:PS50293	PANTHER:PTHR11071
PANTHER:PTHR11071:SF310	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF50891	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000B46B1F6	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:529457730..529463096

Molecular Weight (calculated)

49239.3 Da

IEP (calculated)

6.608

GRAVY (calculated)

-0.410

Length

455 amino acids

Sequence
(BLAST)

001: PTHRTQRSTA PPHSPRSPRS TPPLPLLAAL PPPRSPSVPL GFLPLGAAME GEGECAAAPA PAPAAAAAAE VSNPRCYLDV SIGGEMEGRI VMDLYASVVP
101: RTAENFRALC TGEKGVSAAT AARLHYKGSS FHRIIKGFMV QGGDITAGDG TGGESIYGVN FEDENFVLKH ERKGMLSMAN SGPNTNGSQF FITTTRTPHL
201: DGKHVVFGRV VKGMGVVRAM EHVCAGEADL PTADIAIVNC GELPEGSTEG VANFFKDGDM YPDWPIDLDE KPADVLWWIN AVDSAKSFGN ENFKKHDYKA
301: ALRKYRKAMR YLDICWEKEE IDQENSSALR KTKSIILTNS SACKLKLGDV EGALLDADFA LRETEGNAKA FFRQGQARMV LKNIDAAVES FQRALELEPN
401: DGGIKRELAA AKKKVTDRRN LERKAFSKMF ETSGSSEKSD EVLAASSVKS DEDKN

Best Arabidopsis Sequence Match ( AT2G15790.1 )
(BLAST)

001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V

Arabidopsis Description

CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.