Factsheet for Os02t0761100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0216800-01	Rice	cytosol	82.88	84.34
EES05845	Sorghum	cytosol	82.13	83.59
TraesCS6D01G293100.1	Wheat	cytosol	79.65	78.68
GSMUA_Achr8P23380_001	Banana	cytosol	75.19	78.5
TraesCS6B01G343800.1	Wheat	cytosol	79.4	78.43
GSMUA_Achr5P05580_001	Banana	cytosol	76.18	78.32
TraesCS6A01G313700.1	Wheat	cytosol	78.66	78.08
PGSC0003DMT400066358	Potato	cytosol	69.23	77.07
Solyc01g108340.2.1	Tomato	cytosol	68.73	76.52
VIT_03s0063g01030.t01	Wine grape	cytosol	68.24	76.18
KRH50243	Soybean	cytosol	67.0	74.79
KRH71172	Soybean	cytosol	67.0	74.79
KRH57738	Soybean	cytosol, nucleus	66.75	74.72
KRH04660	Soybean	cytosol, nucleus	66.0	73.89
AT2G15790.1	Thale cress	cytosol	62.53	69.81
HORVU6Hr1G077290.1	Barley	plastid	78.66	69.67
Bra015237.1-P	Field mustard	cytosol	61.29	68.42
CDY36653	Canola	cytosol	61.29	68.42
CDX71247	Canola	cytosol	60.79	67.87
PGSC0003DMT400026079	Potato	cytosol	60.55	67.59
Solyc02g090480.2.1	Tomato	cytosol	58.31	65.1
Os02t0121300-01	Rice	extracellular	26.05	61.05
Os09t0571400-01	Rice	mitochondrion	26.3	59.22
Os10t0154700-01	Rice	cytosol	24.32	54.14
Os09t0537600-01	Rice	endoplasmic reticulum	25.31	47.44
Os06t0708500-01	Rice	plasma membrane, plastid	25.81	46.22
Os03t0811600-01	Rice	nucleus, plastid	23.33	46.08
Os06t0708400-01	Rice	plasma membrane	23.33	45.19
Os05t0103200-01	Rice	plastid	24.81	40.0
Os07t0179200-01	Rice	nucleus	3.72	5.32
Os02t0204300-01	Rice	nucleus	2.23	2.45

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.1	Gene3D:2.40.100.10	EntrezGene:4330806	EMBL:AK070404	ProteinID:BAD17200.1
ProteinID:BAD19412.1	ProteinID:BAF10108.1	ProteinID:BAS81032.1	ncoils:Coil	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
InterPro:IPR029000	EnsemblPlantsGene:Os02g0761100	EnsemblPlants:Os02t0761100-01	PFAM:PF00160	PFAM:PF07719	PRINTS:PR00153
PFscan:PS50005	PFscan:PS50072	PFscan:PS50293	PANTHER:PTHR11071	PANTHER:PTHR11071:SF310	UniProt:Q6Z6H8
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF50891	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_2
InterPro:TPR_repeat	UniParc:UPI000035AE41	RefSeq:XP_015624913.1	SEG:seg	:	:

Description

CYCLOPHILIN 40BSimilar to Cyclophilin-40 (Expressed protein). (Os02t0761100-01)

Coordinates

chr2:+:32047766..32052300

Molecular Weight (calculated)

43955.0 Da

IEP (calculated)

5.276

GRAVY (calculated)

-0.442

Length

403 amino acids

Sequence
(BLAST)

001: MEGGGEGTTT AAAAAAVAAG KEEEAEVVVV RNPRCYLDVS IGGDMEGRIV VELYASVAPR TAENFRALCT GEKGVSAATG VPLHYKGSCI HRIVKGFMVQ
101: GGDITAGDGT GGESIYGLNF EDENFVLKHE RKGMLSMANA GPDTNGSQFF ITTTRTPHLD GKHVVFGRVI KGMGVVRSME HVSVGESDRP ITDIVIVDCG
201: ELPEGASDGV VNFFSDGDMY PDWPNDLEEK PAEISWWMTA VDSAKSFGNE YFKKKDYKTA LKKYRKAMRY LDLCWEKEEI DEEKSSALRK TKSIILTNSS
301: ACKLKLGDLK GALLDADFAL REGEGNPKAF FRQGQARIAL NDIDAAVESF KHALQLEPND GGIKRELAAA KKKIADRRDQ ERKAFSRMFQ PSGGSEKIDE
401: ENN

Best Arabidopsis Sequence Match ( AT2G15790.1 )
(BLAST)

001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V

Arabidopsis Description

CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.