Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030339_P001 | Maize | mitochondrion | 74.59 | 73.77 |
| EER91725 | Sorghum | cytosol | 76.24 | 72.63 |
| Os02t0121300-01 | Rice | extracellular | 60.22 | 63.37 |
| Os09t0571400-01 | Rice | mitochondrion | 59.12 | 59.78 |
| Os09t0537600-01 | Rice | endoplasmic reticulum | 54.14 | 45.58 |
| Os03t0811600-01 | Rice | nucleus, plastid | 50.28 | 44.61 |
| Os06t0708400-01 | Rice | plasma membrane | 49.72 | 43.27 |
| Os06t0708500-01 | Rice | plasma membrane, plastid | 51.38 | 41.33 |
| Os05t0103200-01 | Rice | plastid | 56.91 | 41.2 |
| Os06t0216800-01 | Rice | cytosol | 56.35 | 25.76 |
| Os02t0761100-01 | Rice | cytosol | 54.14 | 24.32 |
| Os02t0204300-01 | Rice | nucleus | 0.0 | 0.0 |
| Os07t0179200-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:4348134 | ProteinID:AAL75728.1 | ProteinID:AAM46050.1 | ProteinID:AAP52189.1 |
| EMBL:AK058898 | ProteinID:BAF26102.1 | ProteinID:BAT09932.1 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| InterPro:IPR002130 | InterPro:IPR029000 | EnsemblPlantsGene:Os10g0154700 | EnsemblPlants:Os10t0154700-01 | PFAM:PF00160 | PIRSF:PIRSF001467 |
| PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF301 | UniProt:Q7G6E4 |
| SUPFAM:SSF50891 | UniParc:UPI00000ABD92 | RefSeq:XP_015613171.1 | SEG:seg | : | : |
Description
CYCLOPHILIN 18-4Similar to Cyclophilin Dicyp-2. (Os10t0154700-01)
Coordinates
chr10:+:3438474..3439397
Molecular Weight (calculated)
18921.6 Da
IEP (calculated)
9.398
GRAVY (calculated)
-0.107
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAASSKSN PRVFLDIAIG GEWVGRVVIE LLADKVPDTA ENFRRLCTGE RAGRSGKSRL HYKGSAFHRV VPGFMCQGGD ITAGNGTGGE SALDGAARHF
101: PDEGFAVKHD GPGVVSMANA GPNTNGSQFF ITVDKAPWLD GRHVAFGRVV AGMGAVRAID RTGTWSGKTV KPVVITDCGV L
101: PDEGFAVKHD GPGVVSMANA GPNTNGSQFF ITVDKAPWLD GRHVAFGRVV AGMGAVRAID RTGTWSGKTV KPVVITDCGV L
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.