Factsheet for Zm00001d030339_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91725	Sorghum	cytosol	86.89	83.68
Os10t0154700-01	Rice	cytosol	73.77	74.59
Zm00001d050635_P001	Maize	plastid	60.66	64.91
Zm00001d016660_P001	Maize	cytosol	60.11	63.95
Zm00001d016661_P001	Maize	plastid	60.11	63.95
Zm00001d009267_P001	Maize	cytosol	3.28	54.55
Zm00001d014732_P002	Maize	mitochondrion	53.01	44.09
Zm00001d022631_P002	Maize	plastid	51.91	43.98
Zm00001d035761_P001	Maize	plastid	53.55	39.04
Zm00001d011104_P001	Maize	plastid	51.91	38.31
Zm00001d036442_P001	Maize	mitochondrion	52.46	34.66
Zm00001d008209_P001	Maize	plastid	47.54	30.96
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	46.99	29.05
Zm00001d013010_P002	Maize	plastid	45.9	27.27
Zm00001d037189_P004	Maize	extracellular	54.1	25.45
Zm00001d007826_P002	Maize	nucleus	49.73	13.58
Zm00001d018944_P004	Maize	nucleus	51.91	13.48
Zm00001d053620_P016	Maize	nucleus	42.62	9.52
Zm00001d015729_P005	Maize	nucleus	42.62	9.08

Protein Annotations

EntrezGene:100282750	MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:B6TB16	EMBL:BT070098	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	EMBL:EU962181	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	ProteinID:ONM00809.1	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153
ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF301	SUPFAM:SSF50891	TMHMM:TMhelix
UniParc:UPI000182CB2B	EnsemblPlantsGene:Zm00001d030339	EnsemblPlants:Zm00001d030339_P001	EnsemblPlants:Zm00001d030339_T001	SEG:seg	:

Description

Peptidyl-prolyl cis-trans isomerase

Coordinates

chr1:-:123359112..123359663

Molecular Weight (calculated)

19488.3 Da

IEP (calculated)

9.341

GRAVY (calculated)

-0.102

Length

183 amino acids

Sequence
(BLAST)

001: MARPQNNQNP RVFLVLNIGG VTVGRVVIEL FADKVPKTAE NFRLLCTGER SVGKWSGKRL HYKGAAFHRV VPGFMCQGGD ITAGNGTGGE SAIGDARYFA
101: DEAFGAVRHD GAGVVSMANA GPNTNGSQFF ITFADAPWLD GRHVAFGRVV DGMDALRAIE KAGSISGRTM RHVVIADCGE LKH

Best Arabidopsis Sequence Match ( AT2G16600.1 )
(BLAST)

001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS

Arabidopsis Description

CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.