Factsheet for Zm00001d014732_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	endoplasmic reticulum

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0708500-01	Rice	plasma membrane, plastid	88.64	86.67
TraesCS7B01G309500.2	Wheat	mitochondrion	85.45	86.24
HORVU7Hr1G095720.2	Barley	mitochondrion	85.45	86.24
TraesCS7A01G410100.2	Wheat	mitochondrion	85.45	86.24
TraesCS7D01G403300.2	Wheat	mitochondrion	85.0	85.78
Solyc06g076970.2.1	Tomato	nucleus	78.18	83.09
VIT_06s0004g06610.t01	Wine grape	endoplasmic reticulum	75.0	82.5
GSMUA_Achr10P...	Banana	endoplasmic reticulum	74.55	82.41
PGSC0003DMT400078234	Potato	endoplasmic reticulum	77.27	82.13
GSMUA_Achr7P17320_001	Banana	endoplasmic reticulum	76.36	80.38
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	74.09	75.46
Zm00001d036442_P001	Maize	mitochondrion	92.27	73.29
Zm00001d050635_P001	Maize	plastid	53.18	68.42
Zm00001d016661_P001	Maize	plastid	52.73	67.44
Zm00001d016660_P001	Maize	cytosol	52.73	67.44
KRG97736	Soybean	endoplasmic reticulum	70.45	65.96
CDY27255	Canola	endoplasmic reticulum	66.82	65.62
CDX72190	Canola	endoplasmic reticulum	66.82	65.62
Bra007200.1-P	Field mustard	endoplasmic reticulum	66.82	65.62
KRH31143	Soybean	endoplasmic reticulum	70.91	65.55
Zm00001d009267_P001	Maize	cytosol	3.18	63.64
AT3G55920.1	Thale cress	endoplasmic reticulum	64.55	62.28
Zm00001d022631_P002	Maize	plastid	52.73	53.7
Zm00001d030339_P001	Maize	mitochondrion	44.09	53.01
Zm00001d011104_P001	Maize	plastid	51.82	45.97
Zm00001d035761_P001	Maize	plastid	51.82	45.42
Zm00001d008209_P001	Maize	plastid	48.64	38.08
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	46.82	34.8
Zm00001d013010_P002	Maize	plastid	40.91	29.22
Zm00001d037189_P004	Maize	extracellular	46.82	26.48
Zm00001d007826_P002	Maize	nucleus	46.36	15.22
Zm00001d018944_P004	Maize	nucleus	45.91	14.33
Zm00001d053620_P016	Maize	nucleus	34.09	9.16
Zm00001d015729_P005	Maize	nucleus	34.09	8.73

Protein Annotations

EntrezGene:100283475	MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A1D6GVX5	ProteinID:AQK67040.1	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF384	SUPFAM:SSF50891
TMHMM:TMhelix	UniParc:UPI00022104ED	EnsemblPlantsGene:Zm00001d014732	EnsemblPlants:Zm00001d014732_P002	EnsemblPlants:Zm00001d014732_T002	SEG:seg

Description

Peptidyl-prolyl cis-trans isomerase%2C microsomal

Coordinates

chr5:+:61076724..61078807

Molecular Weight (calculated)

23618.7 Da

IEP (calculated)

10.197

GRAVY (calculated)

-0.064

Length

220 amino acids

Sequence
(BLAST)

001: MAPSGWRRSA AARVAWRPAT VCLWLALAAA ALTLAQVLVN LAKKDLTEVT HKVYFDIEID GKPAGRIVMG LFGKTVPKTA ENFRALCTGE KGVGKSGKAL
101: HYKGSKFHRI IPSFMLQGGD FTLGDGRGGE SIYGLKFADE NFKIKHTGPG LLSMANAGRD TNGSQFFITT VTTSWLDGKH VVFGKVLSGM DVVYKVEAEG
201: RQSGEPKSKV VIADSGELPM

Best Arabidopsis Sequence Match ( AT2G29960.1 )
(BLAST)

001: MAKASFILLG TLFLFGAIAS IQAKEDLKEV THKVYFDVEI DGKSAGRVVI GLFGKAVPKT AENFRALCTG EKGVGKSGKP LHYKGSKFHR IIPSFMIQGG
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GVLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L

Arabidopsis Description

CYP19-4Peptidyl-prolyl cis-trans isomerase CYP19-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDP4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.