Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016660_P001 | Maize | cytosol | 72.73 | 4.65 |
| Zm00001d016661_P001 | Maize | plastid | 72.73 | 4.65 |
| Zm00001d050635_P001 | Maize | plastid | 63.64 | 4.09 |
| Zm00001d022631_P002 | Maize | plastid | 72.73 | 3.7 |
| Zm00001d030339_P001 | Maize | mitochondrion | 54.55 | 3.28 |
| Zm00001d011104_P001 | Maize | plastid | 72.73 | 3.23 |
| Zm00001d035761_P001 | Maize | plastid | 72.73 | 3.19 |
| Zm00001d014732_P002 | Maize | mitochondrion | 63.64 | 3.18 |
| Zm00001d008209_P001 | Maize | plastid | 72.73 | 2.85 |
| Zm00001d014731_P017 | Maize | endoplasmic reticulum, vacuole | 72.73 | 2.7 |
| Zm00001d013010_P002 | Maize | plastid | 72.73 | 2.6 |
| Zm00001d036442_P001 | Maize | mitochondrion | 63.64 | 2.53 |
| Zm00001d037189_P004 | Maize | extracellular | 63.64 | 1.8 |
| Zm00001d007826_P002 | Maize | nucleus | 54.55 | 0.9 |
| Zm00001d018944_P004 | Maize | nucleus | 54.55 | 0.85 |
| Zm00001d053620_P016 | Maize | nucleus | 54.55 | 0.73 |
| Zm00001d015729_P005 | Maize | nucleus | 54.55 | 0.7 |
Protein Annotations
| EnsemblPlants:Zm00001d009267_P001 | EnsemblPlants:Zm00001d009267_T001 | EnsemblPlantsGene:Zm00001d009267 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 |
| ProteinID:AQK91583.1 | UniParc:UPI0008456174 | UniProt:A0A1D6FIG0 | MapMan:35.2 | : | : |
Description
Peptidyl-prolyl cis-trans isomerase
Coordinates
chr8:+:49298496..49298824
Molecular Weight (calculated)
1251.4 Da
IEP (calculated)
3.750
GRAVY (calculated)
-1.145
Length
11 amino acids
Sequence
(BLAST)
(BLAST)
1: MIQGGDFQQN N
001: MATLSMTLSL SAPPRRLSPI NTSAFTSTSF RLRTKSSFDS ISFSSSTPFS ASSLLLHTSY TKRNHRCFSV QSNAEVVTEP QSKITHKVYF DISVGNPVGK
101: LAGRIVIGLY GDDVPQTVEN FRALCTGEKG FGYKGSTFHR VIRDFMIQGG DFEKGNGTGG KSVYGRTFKD ENFKLSHVGP GVLSMANAGP NTNGSQFFIC
201: TIKTSWLDGR HVVFGQVIEG MEVVKLIEEQ ETDRGDRPRK KVVIADCGQL PMSEA
101: LAGRIVIGLY GDDVPQTVEN FRALCTGEKG FGYKGSTFHR VIRDFMIQGG DFEKGNGTGG KSVYGRTFKD ENFKLSHVGP GVLSMANAGP NTNGSQFFIC
201: TIKTSWLDGR HVVFGQVIEG MEVVKLIEEQ ETDRGDRPRK KVVIADCGQL PMSEA
Arabidopsis Description
PNSL5Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UN74]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.