Factsheet for Zm00001d036442_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 2
extracellular 1
golgi 1
plasma membrane 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014732_P002	Maize	mitochondrion	73.29	92.27
OQU77069	Sorghum	mitochondrion	72.92	91.82
Os06t0708500-01	Rice	plasma membrane, plastid	68.59	84.44
VIT_06s0004g06610.t01	Wine grape	endoplasmic reticulum	60.29	83.5
HORVU7Hr1G095720.2	Barley	mitochondrion	65.7	83.49
TraesCS7B01G309500.2	Wheat	mitochondrion	65.7	83.49
TraesCS7A01G410100.2	Wheat	mitochondrion	65.7	83.49
TraesCS7D01G403300.2	Wheat	mitochondrion	65.34	83.03
GSMUA_Achr10P...	Banana	endoplasmic reticulum	59.57	82.91
Solyc06g076970.2.1	Tomato	nucleus	61.73	82.61
GSMUA_Achr7P17320_001	Banana	endoplasmic reticulum	61.73	81.82
PGSC0003DMT400078234	Potato	endoplasmic reticulum	61.01	81.64
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	58.48	75.0
Zm00001d050635_P001	Maize	plastid	42.24	68.42
Zm00001d016660_P001	Maize	cytosol	41.88	67.44
Zm00001d016661_P001	Maize	plastid	41.88	67.44
KRG97736	Soybean	endoplasmic reticulum	55.23	65.11
KRH31143	Soybean	endoplasmic reticulum	55.6	64.71
Bra007200.1-P	Field mustard	endoplasmic reticulum	51.99	64.29
CDY27255	Canola	endoplasmic reticulum	51.99	64.29
CDX72190	Canola	endoplasmic reticulum	51.62	63.84
Zm00001d009267_P001	Maize	cytosol	2.53	63.64
AT3G55920.1	Thale cress	endoplasmic reticulum	50.18	60.96
Zm00001d022631_P002	Maize	plastid	41.88	53.7
Zm00001d030339_P001	Maize	mitochondrion	34.66	52.46
Zm00001d011104_P001	Maize	plastid	40.43	45.16
Zm00001d035761_P001	Maize	plastid	40.43	44.62
Zm00001d008209_P001	Maize	plastid	38.99	38.43
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	40.43	37.84
Zm00001d013010_P002	Maize	plastid	32.49	29.22
Zm00001d037189_P004	Maize	extracellular	37.91	26.99
Zm00001d007826_P002	Maize	nucleus	36.46	15.07
Zm00001d018944_P004	Maize	nucleus	36.1	14.18
Zm00001d053620_P016	Maize	nucleus	27.8	9.4
Zm00001d015729_P005	Maize	nucleus	27.8	8.96

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A1D6LN76	ProteinID:AQK81019.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF384	SUPFAM:SSF50891	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000843C7A9	EnsemblPlantsGene:Zm00001d036442	EnsemblPlants:Zm00001d036442_P001	EnsemblPlants:Zm00001d036442_T001	SEG:seg	:

Description

Peptidyl-prolyl cis-trans isomerase CYP20-1

Coordinates

chr6:-:88733496..88736281

Molecular Weight (calculated)

30503.8 Da

IEP (calculated)

10.071

GRAVY (calculated)

-0.051

Length

277 amino acids

Sequence
(BLAST)

001: METSGWRRRA AARASWSPAT VYLWLALAAA ALTLAQAKKD LTEVTHKVYF DVEIDGKPAG LLRHPLAFSM SDSQISTLRR RIVMGLFGKT VPKTAENFRA
101: LCTEVPFQIL NSFTSVKYLS DVLLDSYKSL VWFWFHVALN FLVYTGEKGI GKSGKALHYK GSTFHRIIPS FMLQGGDFTL GDGRGGESIY GMKFADENFK
201: IKHTGPGLLS MANAGRDTNG SQFFITTVTT SWLDGKHVVF GKVLSGMDVV YKVEAEGRQS GQPKSKVVIA DSGELPM

Best Arabidopsis Sequence Match ( AT2G29960.1 )
(BLAST)

001: MAKASFILLG TLFLFGAIAS IQAKEDLKEV THKVYFDVEI DGKSAGRVVI GLFGKAVPKT AENFRALCTG EKGVGKSGKP LHYKGSKFHR IIPSFMIQGG
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GVLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L

Arabidopsis Description

CYP19-4Peptidyl-prolyl cis-trans isomerase CYP19-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDP4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.