Factsheet for Bra007200.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 6
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27255	Canola	endoplasmic reticulum	100.0	100.0
AT3G55920.1	Thale cress	endoplasmic reticulum	93.3	91.67
Bra018353.1-P	Field mustard	endoplasmic reticulum	66.52	74.13
Bra006748.1-P	Field mustard	endoplasmic reticulum	64.29	71.64
GSMUA_Achr10P...	Banana	endoplasmic reticulum	62.95	70.85
Bra002623.1-P	Field mustard	cytosol	60.71	69.39
GSMUA_Achr7P17320_001	Banana	endoplasmic reticulum	64.73	69.38
Bra033574.1-P	Field mustard	cytosol	52.68	68.6
TraesCS7B01G309500.2	Wheat	mitochondrion	66.52	68.35
TraesCS7A01G410100.2	Wheat	mitochondrion	66.52	68.35
HORVU7Hr1G095720.2	Barley	mitochondrion	66.52	68.35
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	65.62	68.06
Solyc06g051650.2.1	Tomato	endoplasmic reticulum	68.3	68.0
TraesCS7D01G403300.2	Wheat	mitochondrion	66.07	67.89
Bra011568.1-P	Field mustard	cytosol	51.79	67.84
Os06t0708500-01	Rice	plasma membrane, plastid	67.41	67.11
VIT_13s0067g00870.t01	Wine grape	endoplasmic reticulum	68.3	67.11
Zm00001d014732_P002	Maize	mitochondrion	65.62	66.82
PGSC0003DMT400016955	Potato	endoplasmic reticulum	67.86	66.38
OQU77069	Sorghum	mitochondrion	65.18	66.36
Bra010728.1-P	Field mustard	cytosol	50.89	66.28
KRG97736	Soybean	endoplasmic reticulum	69.2	65.96
KRH31143	Soybean	endoplasmic reticulum	69.64	65.55
Bra037296.1-P	Field mustard	cytosol	49.11	64.33
Bra007214.1-P	Field mustard	cytosol	50.0	61.54
Zm00001d036442_P001	Maize	mitochondrion	64.29	51.99
Bra011574.1-P	Field mustard	endoplasmic reticulum	51.34	51.34
Bra034667.1-P	Field mustard	endoplasmic reticulum	49.55	49.78
Bra005088.1-P	Field mustard	plastid	44.64	49.02
Bra017105.1-P	Field mustard	plastid	44.64	48.31
Bra006182.1-P	Field mustard	plastid	50.45	43.97
Bra007655.1-P	Field mustard	plastid	50.0	43.58
Bra014414.1-P	Field mustard	plastid	50.0	43.41
Bra015237.1-P	Field mustard	cytosol	45.54	28.25
Bra040447.1-P	Field mustard	nucleus	46.88	19.85
Bra011346.1-P	Field mustard	nucleus	39.29	11.4

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra007200	EnsemblPlants:Bra007200.1	EnsemblPlants:Bra007200.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005802	GO:GO:0005886	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130
InterPro:IPR029000	UniProt:M4CSK8	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF384	SUPFAM:SSF50891	TMHMM:TMhelix	UniParc:UPI0002542B0A
SEG:seg	:	:	:	:	:

Description

AT3G55920 (E=3e-107) | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative

Coordinates

chrA09:-:27928345..27929725

Molecular Weight (calculated)

24045.2 Da

IEP (calculated)

7.075

GRAVY (calculated)

0.086

Length

224 amino acids

Sequence
(BLAST)

001: MAITATRLVS LTLLWIVVLF VTLALIQIKL TDVADPMVNE KVADQVGEDL EGVTHKVYFD IQINGSPAGR ILIGLFGKIV PKTAENFRAL CTGEKGVGNM
101: GKPLYFKGST FHRIIPSFMI QGGDFTRGDG RGGESIYGDK FADENFKLKH TGPGVLSMAN SGPDSNGSQF FITTVTTGWL DGHHVVFGKV LSGMEVVRKI
201: EAQGQSSGEP KGKVIILDSG EVSL

Best Arabidopsis Sequence Match ( AT3G55920.1 )
(BLAST)

001: MAITATRLVS LTLLWIVVLF VTLALIQIKL TDVADPSVNE KILDAKLNQV GEDLEGVTHK VYFDIQINGS PAGRILIGLF GNIVPKTAEN FRSLCTGEKG
101: VGNMGKPLYF KGSSFHRIIP GFMIQGGDFT RGDGRGGESI YGDKFADENF KLKHTGPGFL SMANSGPDSN GSQFFITTVT TSWLDGHHVV FGKVLSGMEV
201: VRKIEAQGQD SGVPKANVII FASGEVSL

Arabidopsis Description

CYP21-2Peptidyl-prolyl cis-trans isomerase CYP21-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.