Factsheet for Bra033574.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22414	Canola	cytosol, extracellular	100.0	100.0
Bra010728.1-P	Field mustard	cytosol	91.86	91.86
AT2G21130.1	Thale cress	cytosol	89.53	88.51
KRH60719	Soybean	cytosol, endoplasmic reticulum, mitochondrion	85.47	85.47
KRH51416	Soybean	cytosol	84.88	84.88
KRH29120	Soybean	endoplasmic reticulum, nucleus	84.88	84.88
KRH24153	Soybean	endoplasmic reticulum, mitochondrion, nucleus	83.72	83.72
Solyc10g054910.1.1	Tomato	extracellular, unclear	82.56	82.56
PGSC0003DMT400011344	Potato	cytosol	82.56	82.56
VIT_03s0038g01930.t01	Wine grape	cytosol	81.4	81.4
EES05164	Sorghum	cytosol	81.4	81.4
Solyc01g111170.2.1	Tomato	extracellular, nucleus	80.81	81.29
VIT_18s0001g14400.t01	Wine grape	extracellular	80.81	80.81
Bra011568.1-P	Field mustard	cytosol	80.23	80.7
PGSC0003DMT400004125	Potato	extracellular	80.23	80.7
Zm00001d050635_P001	Maize	plastid	79.65	80.12
Bra037296.1-P	Field mustard	cytosol	79.65	80.12
Zm00001d016660_P001	Maize	cytosol	79.07	79.07
Zm00001d016661_P001	Maize	plastid	79.07	79.07
EES04388	Sorghum	cytosol	78.49	78.95
TraesCS6B01G093100.2	Wheat	cytosol	78.49	78.95
TraesCS6D01G066700.1	Wheat	golgi, plastid	77.91	78.36
TraesCS6A01G068900.1	Wheat	cytosol	77.91	78.36
Os02t0121300-01	Rice	extracellular	76.74	76.74
TraesCS6A01G405900.1	Wheat	cytosol	70.35	72.46
Bra007214.1-P	Field mustard	cytosol	74.42	70.33
HORVU6Hr1G012570.2	Barley	cytosol	79.07	66.02
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	72.09	65.61
Bra006748.1-P	Field mustard	endoplasmic reticulum	72.09	61.69
Bra002623.1-P	Field mustard	cytosol	69.77	61.22
Bra018353.1-P	Field mustard	endoplasmic reticulum	69.77	59.7
TraesCS6B01G450300.1	Wheat	cytosol	69.19	54.34
Bra007200.1-P	Field mustard	endoplasmic reticulum	68.6	52.68
TraesCS6B01G450400.1	Wheat	cytosol	66.86	52.51
TraesCS6A01G405800.1	Wheat	cytosol	73.26	51.01
Bra005088.1-P	Field mustard	plastid	58.14	49.02
Bra017105.1-P	Field mustard	plastid	57.56	47.83
Bra011574.1-P	Field mustard	endoplasmic reticulum	58.72	45.09
Bra034667.1-P	Field mustard	endoplasmic reticulum	56.98	43.95
Bra006182.1-P	Field mustard	plastid	65.12	43.58
Bra007655.1-P	Field mustard	plastid	64.53	43.19
Bra014414.1-P	Field mustard	plastid	63.95	42.64
Bra015237.1-P	Field mustard	cytosol	62.21	29.64
Bra040447.1-P	Field mustard	nucleus	63.95	20.79
Bra011346.1-P	Field mustard	nucleus	49.42	11.01

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra033574	EnsemblPlants:Bra033574.1	EnsemblPlants:Bra033574.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0001932	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006457	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009585	GO:GO:0009605
GO:GO:0009628	GO:GO:0009704	GO:GO:0009719	GO:GO:0009735	GO:GO:0009742	GO:GO:0009785
GO:GO:0009791	GO:GO:0009987	GO:GO:0016020	GO:GO:0016853	GO:GO:0019538	GO:GO:0046686
GO:GO:0048046	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4EXN7	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF382	SUPFAM:SSF50891
UniParc:UPI000182BB34	SEG:seg	:	:	:	:

Description

AT4G38740 (E=5e-074) ROC1 | ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase

Coordinates

chrA06:+:26157349..26157867

Molecular Weight (calculated)

18384.9 Da

IEP (calculated)

8.334

GRAVY (calculated)

-0.295

Length

172 amino acids

Sequence
(BLAST)

001: MAFPKVFFDI NINGQAAGRI VMELYTDKTP KTAENFRALC TGEKGVGRKG KPLHFKGSSF HRVIPSFMCQ GGDFTAGNGT GGESIYGDKF EDENFERKHT
101: GPGNLSMANA GANTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSSSGKPS KPVVIADCGQ LS

Best Arabidopsis Sequence Match ( AT4G38740.1 )
(BLAST)

001: MAFPKVYFDM TIDGQPAGRI VMELYTDKTP RTAENFRALC TGEKGVGGTG KPLHFKGSKF HRVIPNFMCQ GGDFTAGNGT GGESIYGSKF EDENFERKHT
101: GPGILSMANA GANTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSSSGKPT KPVVVADCGQ LS

Arabidopsis Description

CYP18-3Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V2S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.