Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G093100.2 | Wheat | cytosol | 60.27 | 77.19 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 76.71 | 76.71 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 65.75 | 76.19 |
| Zm00001d050635_P001 | Maize | plastid | 59.36 | 76.02 |
| EES05164 | Sorghum | cytosol | 58.9 | 75.0 |
| EES04388 | Sorghum | cytosol | 58.45 | 74.85 |
| Zm00001d016661_P001 | Maize | plastid | 58.45 | 74.42 |
| Zm00001d016660_P001 | Maize | cytosol | 58.45 | 74.42 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 83.56 | 74.09 |
| KRH51416 | Soybean | cytosol | 56.62 | 72.09 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 56.16 | 71.93 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 56.16 | 71.51 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 56.16 | 71.51 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 55.71 | 70.93 |
| CDY47469 | Canola | cytosol | 55.25 | 70.76 |
| Bra037296.1-P | Field mustard | cytosol | 55.25 | 70.76 |
| PGSC0003DMT400004125 | Potato | extracellular | 55.25 | 70.76 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 48.4 | 70.2 |
| CDY26779 | Canola | cytosol | 54.79 | 70.18 |
| Bra011568.1-P | Field mustard | cytosol | 54.34 | 69.59 |
| Bra033574.1-P | Field mustard | cytosol | 54.34 | 69.19 |
| Bra010728.1-P | Field mustard | cytosol | 54.34 | 69.19 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 54.34 | 69.19 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 54.34 | 69.19 |
| CDX72741 | Canola | cytosol | 54.34 | 69.19 |
| CDX90292 | Canola | cytosol | 54.34 | 69.19 |
| CDY12100 | Canola | cytosol | 54.34 | 69.19 |
| CDY22414 | Canola | cytosol, extracellular | 54.34 | 69.19 |
| PGSC0003DMT400011344 | Potato | cytosol | 53.88 | 68.6 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 53.88 | 68.6 |
| AT2G21130.1 | Thale cress | cytosol | 54.34 | 68.39 |
| CDX69094 | Canola | cytosol | 53.42 | 68.02 |
| AT4G38740.1 | Thale cress | cytosol | 52.97 | 67.44 |
| AT2G16600.1 | Thale cress | cytosol | 52.97 | 67.05 |
| AT4G34870.1 | Thale cress | cytosol | 50.68 | 64.53 |
| TraesCS7B01G309500.2 | Wheat | mitochondrion | 51.6 | 51.83 |
| TraesCS5B01G478800.1 | Wheat | plastid | 41.1 | 45.45 |
| TraesCS5B01G329000.1 | Wheat | endoplasmic reticulum | 44.75 | 45.37 |
| TraesCS1B01G011100.1 | Wheat | plastid | 44.75 | 40.0 |
| TraesCS3B01G178000.1 | Wheat | plastid | 41.55 | 37.92 |
| TraesCS7B01G080700.1 | Wheat | cytosol | 46.58 | 26.84 |
| TraesCS6B01G343800.1 | Wheat | cytosol | 47.03 | 25.25 |
| TraesCS2B01G260600.1 | Wheat | nucleus | 45.66 | 15.75 |
| TraesCS6B01G208900.2 | Wheat | cytosol | 40.64 | 10.48 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001810 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PFAM:PF12937 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 |
| PANTHER:PTHR11071 | PANTHER:PTHR11071:SF403 | SMART:SM00256 | SUPFAM:SSF50891 | SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS6B01G450300 |
| EnsemblPlants:TraesCS6B01G450300.1 | TIGR:cd01926 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:+:709120233..709120892
Molecular Weight (calculated)
23541.8 Da
IEP (calculated)
9.120
GRAVY (calculated)
0.047
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGTHGDGNG VCFPYDVLLD ILRRLPCHAI AKSRHVCRAW RTLVDAHNLL LLPTVFFDVT IGGAPAGRIV MRLFAKDVPK MAENFRALCT GEKGVGRSGK
101: PLHYKGSAFH RVIPGFMCQG GGITRGNGLG GESIYGGDFP DEKFVYKHMP GMISMANAGP NTNSSHFFIS TVPCPWLDGK HVVFGEVIVG MAVVRNIEKV
201: GSRSGTCSKP VVIADSGQL
101: PLHYKGSAFH RVIPGFMCQG GGITRGNGLG GESIYGGDFP DEKFVYKHMP GMISMANAGP NTNSSHFFIS TVPCPWLDGK HVVFGEVIVG MAVVRNIEKV
201: GSRSGTCSKP VVIADSGQL
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.