Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
23391302
extracellular: 27664331 |
msms PMID:
23391302
doi
Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.
msms PMID:
27664331
doi
Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 88.95 | 88.95 |
| KRH51416 | Soybean | cytosol | 88.37 | 88.37 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 87.21 | 87.21 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 86.05 | 86.05 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 74.42 | 84.77 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 84.3 | 84.3 |
| AT4G38740.1 | Thale cress | cytosol | 83.72 | 83.72 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 83.72 | 83.72 |
| PGSC0003DMT400011344 | Potato | cytosol | 83.72 | 83.72 |
| CDY12100 | Canola | cytosol | 83.72 | 83.72 |
| CDX90292 | Canola | cytosol | 83.72 | 83.72 |
| Bra010728.1-P | Field mustard | cytosol | 83.72 | 83.72 |
| PGSC0003DMT400004125 | Potato | extracellular | 83.14 | 83.63 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 82.56 | 83.04 |
| CDX72741 | Canola | cytosol | 81.4 | 81.4 |
| Os02t0121300-01 | Rice | extracellular | 81.4 | 81.4 |
| EES04388 | Sorghum | cytosol | 80.81 | 81.29 |
| CDY22414 | Canola | cytosol, extracellular | 80.81 | 80.81 |
| Bra033574.1-P | Field mustard | cytosol | 80.81 | 80.81 |
| Zm00001d050635_P001 | Maize | plastid | 80.23 | 80.7 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 80.23 | 80.7 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 80.23 | 80.7 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 80.23 | 80.7 |
| Zm00001d016661_P001 | Maize | plastid | 80.23 | 80.23 |
| Zm00001d016660_P001 | Maize | cytosol | 80.23 | 80.23 |
| EES05164 | Sorghum | cytosol | 79.65 | 79.65 |
| AT2G21130.1 | Thale cress | cytosol | 79.65 | 78.74 |
| VIT_14s0081g00700.t01 | Wine grape | cytosol | 77.91 | 77.01 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 71.51 | 73.65 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 81.4 | 67.96 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 73.26 | 66.67 |
| VIT_06s0004g06610.t01 | Wine grape | endoplasmic reticulum | 67.44 | 58.0 |
| VIT_13s0084g00620.t01 | Wine grape | cytosol | 60.47 | 55.03 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 69.19 | 54.34 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 66.28 | 52.05 |
| VIT_13s0067g00870.t01 | Wine grape | endoplasmic reticulum | 66.86 | 50.44 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 72.09 | 50.2 |
| VIT_03s0038g02200.t01 | Wine grape | endoplasmic reticulum | 57.56 | 44.39 |
| VIT_01s0146g00110.t01 | Wine grape | plastid | 63.37 | 41.6 |
| VIT_07s0005g02410.t01 | Wine grape | plastid | 61.05 | 41.5 |
| VIT_03s0063g01030.t01 | Wine grape | cytosol | 61.05 | 29.09 |
| VIT_00s0179g00290.t01 | Wine grape | endoplasmic reticulum, golgi | 66.86 | 15.82 |
| VIT_04s0008g05090.t01 | Wine grape | nucleus | 55.81 | 12.06 |
Protein Annotations
| EntrezGene:100247119 | wikigene:100247119 | MapMan:18.12.1 | Gene3D:2.40.100.10 | UniProt:A5AKD8 | EMBL:AM428740 |
| ProteinID:CAN64643 | ProteinID:CAN64643.1 | ProteinID:CCB46042 | ProteinID:CCB46042.1 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | EMBL:FN595227 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | EntrezGene:LOC100247119 | wikigene:LOC100247119 |
| PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF382 | SUPFAM:SSF50891 | TIGR:TC54832 | TIGR:TC69148 | UniParc:UPI000151EB83 | ArrayExpress:VIT_18s0001g14400 |
| EnsemblPlantsGene:VIT_18s0001g14400 | EnsemblPlants:VIT_18s0001g14400.t01 | RefSeq:XP_002274869 | RefSeq:XP_002274869.1 | RefSeq:XP_003634388 | RefSeq:XP_003634388.1 |
| RefSeq:XP_003634389 | RefSeq:XP_003634389.1 | SEG:seg | : | : | : |
Description
Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A5AKD8]
Coordinates
chr18:+:12377314..12378089
Molecular Weight (calculated)
17939.4 Da
IEP (calculated)
8.970
GRAVY (calculated)
-0.098
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPKVFFDM SVGGVPAGRI VMELFADTTP RTAENFRALC TGEKGTGRSG KPLHYKGSKF HRVIPGFMCQ GGDFTAGNGT GGESIYGSKF ADENFIHKHT
101: GPGILSMANA GPGTNGSQFF ICTAKTSWLD GKHVVFGKVI EGLDVVKAIE KVGSSSGSTA KAVVVSDCGQ LS
101: GPGILSMANA GPGTNGSQFF ICTAKTSWLD GKHVVFGKVI EGLDVVKAIE KVGSSSGSTA KAVVVSDCGQ LS
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.