Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 100.0 | 100.0 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 98.83 | 98.83 |
| Os02t0121300-01 | Rice | extracellular | 87.72 | 87.21 |
| Bra037296.1-P | Field mustard | cytosol | 82.46 | 82.46 |
| CDY47469 | Canola | cytosol | 82.46 | 82.46 |
| Bra010728.1-P | Field mustard | cytosol | 82.46 | 81.98 |
| CDX90292 | Canola | cytosol | 82.46 | 81.98 |
| CDY12100 | Canola | cytosol | 82.46 | 81.98 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 82.46 | 81.98 |
| KRH51416 | Soybean | cytosol | 82.46 | 81.98 |
| Bra011568.1-P | Field mustard | cytosol | 81.87 | 81.87 |
| CDY26779 | Canola | cytosol | 81.87 | 81.87 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 98.25 | 81.55 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 79.53 | 81.44 |
| CDX69094 | Canola | cytosol | 81.87 | 81.4 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 81.87 | 81.4 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 81.29 | 80.81 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 80.7 | 80.7 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 80.7 | 80.23 |
| PGSC0003DMT400004125 | Potato | extracellular | 80.12 | 80.12 |
| PGSC0003DMT400011344 | Potato | cytosol | 80.12 | 79.65 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 80.12 | 79.65 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 80.12 | 79.65 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 70.18 | 79.47 |
| AT4G38740.1 | Thale cress | cytosol | 79.53 | 79.07 |
| CDY22414 | Canola | cytosol, extracellular | 78.36 | 77.91 |
| CDX72741 | Canola | cytosol | 78.36 | 77.91 |
| Bra033574.1-P | Field mustard | cytosol | 78.36 | 77.91 |
| AT2G21130.1 | Thale cress | cytosol | 78.36 | 77.01 |
| AT2G16600.1 | Thale cress | cytosol | 77.78 | 76.88 |
| AT4G34870.1 | Thale cress | cytosol | 75.44 | 75.0 |
| TraesCS4A01G312600.1 | Wheat | cytosol, mitochondrion, plastid | 72.51 | 68.89 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 81.29 | 56.28 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 67.25 | 52.75 |
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 57.89 | 50.0 |
| TraesCS5A01G328900.1 | Wheat | endoplasmic reticulum | 57.31 | 45.37 |
| TraesCS1A01G007500.1 | Wheat | golgi | 63.16 | 44.08 |
| TraesCS3A01G151100.1 | Wheat | plastid | 59.06 | 42.08 |
| TraesCS7A01G175300.1 | Wheat | cytosol | 64.33 | 29.02 |
| TraesCS6A01G313700.1 | Wheat | cytosol | 63.16 | 26.6 |
| TraesCS2A01G237700.1 | Wheat | nucleus | 58.48 | 15.55 |
| TraesCS6A01G176900.1 | Wheat | nucleus | 54.97 | 11.42 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF403 | SUPFAM:SSF50891 | EnsemblPlantsGene:TraesCS6A01G068900 | EnsemblPlants:TraesCS6A01G068900.1 | TIGR:cd01926 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:37407517..37408032
Molecular Weight (calculated)
18392.1 Da
IEP (calculated)
8.379
GRAVY (calculated)
-0.202
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPRVFFDM TVGGAPAGRI VMELYKDAVP RTVENFRALC TGEKGVGKSG KPLHYKGSAF HRVIPDFMCQ GGDFTRGNGT GGESIYGEKF ADEKFVHKHT
101: KPGILSMANA GPNTNGSQFF ICTVPCNWLD GKHVVFGEVV EGMDVVKNIE KVGSRSGTCS KQVVIADCGQ L
101: KPGILSMANA GPNTNGSQFF ICTVPCNWLD GKHVVFGEVV EGMDVVKNIE KVGSRSGTCS KQVVIADCGQ L
001: MASHPKVFFD MTIGGAPAGK IVMELYTDKT PKTAENFRAL CTGEKGVGRS GKPLHFKGSS FHRVIPNFMC QGGDFTKGNG TGGESIYGAK FEDENFERKH
101: TGPGILSMAN AGANTNGSQF FICTVKTDWL DGKHVVFGQV VEGLDVVKAI EKIGSSSGKP TKPVVIADCG EISS
101: TGPGILSMAN AGANTNGSQF FICTVKTDWL DGKHVVFGQV VEGLDVVKAI EKIGSSSGKP TKPVVIADCG EISS
Arabidopsis Description
CYP19-2Peptidyl-prolyl cis-trans isomerase CYP19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKQ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.