Factsheet for Bra037296.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47469	Canola	cytosol	100.0	100.0
CDY26779	Canola	cytosol	99.42	99.42
AT2G16600.1	Thale cress	cytosol	91.23	90.17
Bra011568.1-P	Field mustard	cytosol	83.04	83.04
EES05164	Sorghum	cytosol	83.04	82.56
Zm00001d050635_P001	Maize	plastid	82.46	82.46
TraesCS6D01G066700.1	Wheat	golgi, plastid	82.46	82.46
TraesCS6A01G068900.1	Wheat	cytosol	82.46	82.46
EES04388	Sorghum	cytosol	81.87	81.87
TraesCS6B01G093100.2	Wheat	cytosol	81.87	81.87
Bra010728.1-P	Field mustard	cytosol	81.87	81.4
Zm00001d016660_P001	Maize	cytosol	81.29	80.81
Zm00001d016661_P001	Maize	plastid	81.29	80.81
Os02t0121300-01	Rice	extracellular	80.7	80.23
Bra033574.1-P	Field mustard	cytosol	80.12	79.65
TraesCS6A01G405900.1	Wheat	cytosol	72.51	74.25
Bra007214.1-P	Field mustard	cytosol	74.85	70.33
HORVU6Hr1G012570.2	Barley	cytosol	81.87	67.96
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	74.27	67.2
Bra002623.1-P	Field mustard	cytosol	71.34	62.24
Bra006748.1-P	Field mustard	endoplasmic reticulum	71.93	61.19
Bra018353.1-P	Field mustard	endoplasmic reticulum	71.34	60.7
TraesCS6B01G450300.1	Wheat	cytosol	70.76	55.25
TraesCS6B01G450400.1	Wheat	cytosol	66.67	52.05
TraesCS6A01G405800.1	Wheat	cytosol	74.85	51.82
Bra007200.1-P	Field mustard	endoplasmic reticulum	64.33	49.11
Bra005088.1-P	Field mustard	plastid	58.48	49.02
Bra017105.1-P	Field mustard	plastid	58.48	48.31
Bra006182.1-P	Field mustard	plastid	70.18	46.69
Bra011574.1-P	Field mustard	endoplasmic reticulum	57.31	43.75
Bra014414.1-P	Field mustard	plastid	64.91	43.02
Bra007655.1-P	Field mustard	plastid	64.33	42.8
Bra034667.1-P	Field mustard	endoplasmic reticulum	54.97	42.15
Bra015237.1-P	Field mustard	cytosol	62.57	29.64
Bra040447.1-P	Field mustard	nucleus	61.4	19.85
Bra011346.1-P	Field mustard	nucleus	48.54	10.75

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra037296	EnsemblPlants:Bra037296.1	EnsemblPlants:Bra037296.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005829	GO:GO:0005886	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016853
GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4F885	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF382	SUPFAM:SSF50891
UniParc:UPI0001BA82C9	SEG:seg	:	:	:	:

Description

AT2G16600 (E=1e-082) ROC3 | ROC3; peptidyl-prolyl cis-trans isomerase

Coordinates

chrA09:+:4474054..4474569

Molecular Weight (calculated)

18384.0 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.274

Length

171 amino acids

Sequence
(BLAST)

001: MVNPKVYFDM TVGDKAAGRI VMELYADTVP ETAENFRALC TGEKGIGKSG KPLHYKGSAF HRVIPKFMCQ GGDFTAGNGT GGESIYGMKF KDENFVKKHT
101: GPGILSMANA GSNTNGSQFF ICTEKTSWLD GKHVVFGQVV EGMDVVRDIE KVGSDSGRTS KKVVIADCGQ L

Best Arabidopsis Sequence Match ( AT2G16600.1 )
(BLAST)

001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS

Arabidopsis Description

CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.