Factsheet for Bra002623.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52123	Canola	endoplasmic reticulum	93.88	90.2
CDX80340	Canola	endoplasmic reticulum	93.88	90.2
AT5G58710.1	Thale cress	endoplasmic reticulum	91.84	88.24
Bra006748.1-P	Field mustard	endoplasmic reticulum	88.27	86.07
KRH30309	Soybean	endoplasmic reticulum	86.22	82.84
KRG98290	Soybean	endoplasmic reticulum	86.22	82.84
Bra018353.1-P	Field mustard	endoplasmic reticulum	83.67	81.59
Bra037296.1-P	Field mustard	cytosol	62.24	71.34
Bra010728.1-P	Field mustard	cytosol	61.73	70.35
Bra033574.1-P	Field mustard	cytosol	61.22	69.77
Bra011568.1-P	Field mustard	cytosol	59.69	68.42
GSMUA_Achr7P04880_001	Banana	cytosol	66.33	67.01
Bra007214.1-P	Field mustard	cytosol	58.67	63.19
Os06t0708400-01	Rice	plasma membrane	65.82	62.02
OQU77068	Sorghum	endoplasmic reticulum	66.33	61.03
Bra007200.1-P	Field mustard	endoplasmic reticulum	69.39	60.71
EER88931	Sorghum	endoplasmic reticulum	63.78	56.56
EER88932	Sorghum	endoplasmic reticulum	63.27	56.11
Bra011574.1-P	Field mustard	endoplasmic reticulum	59.69	52.23
Bra034667.1-P	Field mustard	endoplasmic reticulum	55.1	48.43
Bra005088.1-P	Field mustard	plastid	48.47	46.57
Bra017105.1-P	Field mustard	plastid	48.47	45.89
Bra006182.1-P	Field mustard	plastid	59.69	45.53
Bra007655.1-P	Field mustard	plastid	59.18	45.14
Bra014414.1-P	Field mustard	plastid	57.65	43.8
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	53.57	35.47
Bra015237.1-P	Field mustard	cytosol	50.51	27.42
Bra040447.1-P	Field mustard	nucleus	53.57	19.85
Bra011346.1-P	Field mustard	nucleus	44.39	11.27

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra002623	EnsemblPlants:Bra002623.1	EnsemblPlants:Bra002623.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4CEJ2	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF384
SUPFAM:SSF50891	UniParc:UPI0002543758	:	:	:	:

Description

AT5G58710 (E=2e-101) ROC7 | ROC7; peptidyl-prolyl cis-trans isomerase

Coordinates

chrA10:+:8511531..8512879

Molecular Weight (calculated)

21433.8 Da

IEP (calculated)

9.777

GRAVY (calculated)

-0.374

Length

196 amino acids

Sequence
(BLAST)

001: MREKNGLHLF IKERAKKSKE NLKEITHKVY FDVEIDGKEA GRIVMGLFGK TVPKTAENFR ALCTGEKGIG KKGKALHYKG SSFHRIIPSF MLQGGDFTHG
101: NGMGGESIYG ETFADENFKL KHTGPGFLSM ANAGQDTNGS QFFITTVTTS WLDGRHVVFG KVVTGMDVVY KIEAEGNQSG TPKSKVVIVD SGELPL

Best Arabidopsis Sequence Match ( AT5G58710.1 )
(BLAST)

001: MASSVTLLLW SLLLLGTLSA IQAKKSKENL KEITHKVYFD VEIDGKAAGR IVMGLFGKTV PKTVENFRAL CTGEKGIGKN GKALHYKGSS FHRIIPSFML
101: QGGDFTHGNG MGGESIYGEK FADENFKLKH TGPGFLSMAN AGQDTNGSQF FITTVTTSWL DGRHVVFGKV VTGMDVVYKV EAEGNQSGTP KSKVVIVDSG
201: ELPL

Arabidopsis Description

CYP20-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UBF4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.