Factsheet for Bra018353.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 6
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019694.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G29960.1	Bra019694.1-P	AT1G13980.1	10715321

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58941	Canola	endoplasmic reticulum	100.0	100.0
CDY55458	Canola	endoplasmic reticulum	99.0	99.0
AT2G29960.1	Thale cress	endoplasmic reticulum	92.04	92.04
KRG98290	Soybean	endoplasmic reticulum	87.06	85.78
KRH30309	Soybean	endoplasmic reticulum	87.06	85.78
Bra006748.1-P	Field mustard	endoplasmic reticulum	84.58	84.58
Bra002623.1-P	Field mustard	cytosol	81.59	83.67
Bra037296.1-P	Field mustard	cytosol	60.7	71.34
Bra011568.1-P	Field mustard	cytosol	59.7	70.18
Bra010728.1-P	Field mustard	cytosol	59.7	69.77
Bra033574.1-P	Field mustard	cytosol	59.7	69.77
GSMUA_Achr7P04880_001	Banana	cytosol	65.17	67.53
Bra007200.1-P	Field mustard	endoplasmic reticulum	74.13	66.52
Os06t0708400-01	Rice	plasma membrane	67.66	65.38
OQU77068	Sorghum	endoplasmic reticulum	68.16	64.32
Bra007214.1-P	Field mustard	cytosol	57.71	63.74
EER88931	Sorghum	endoplasmic reticulum	66.67	60.63
EER88932	Sorghum	endoplasmic reticulum	65.67	59.73
Bra011574.1-P	Field mustard	endoplasmic reticulum	61.19	54.91
Bra034667.1-P	Field mustard	endoplasmic reticulum	57.21	51.57
Bra005088.1-P	Field mustard	plastid	48.76	48.04
Bra017105.1-P	Field mustard	plastid	48.76	47.34
Bra006182.1-P	Field mustard	plastid	58.21	45.53
Bra007655.1-P	Field mustard	plastid	56.72	44.36
Bra014414.1-P	Field mustard	plastid	55.72	43.41
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	54.23	36.82
Bra015237.1-P	Field mustard	cytosol	50.75	28.25
Bra040447.1-P	Field mustard	nucleus	52.24	19.85
Bra011346.1-P	Field mustard	nucleus	45.27	11.79

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra018353	EnsemblPlants:Bra018353.1	EnsemblPlants:Bra018353.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005771	GO:GO:0005783	GO:GO:0005794	GO:GO:0005795	GO:GO:0005829	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016853
GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4DPB2	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF384	SUPFAM:SSF50891
SignalP:SignalP-noTM	UniParc:UPI000189D7C3	SEG:seg	:	:	:

Description

AT2G29960 (E=5e-101) CYP5, ATCYP5, CYP19-4 | CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase

Coordinates

chrA05:+:7710367..7711559

Molecular Weight (calculated)

21685.2 Da

IEP (calculated)

9.358

GRAVY (calculated)

-0.143

Length

201 amino acids

Sequence
(BLAST)

001: MARSTSILFL TLLLSASLAL IQAKEDLKEI THKVYFDVEI DGKEAGRVVI GLFGKTVPKT AENFRALCTG EKGVGKSGKP LHYKGSKFHR IIPSFMIQGG
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GLLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L

Best Arabidopsis Sequence Match ( AT2G29960.1 )
(BLAST)

001: MAKASFILLG TLFLFGAIAS IQAKEDLKEV THKVYFDVEI DGKSAGRVVI GLFGKAVPKT AENFRALCTG EKGVGKSGKP LHYKGSKFHR IIPSFMIQGG
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GVLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L

Arabidopsis Description

CYP19-4Peptidyl-prolyl cis-trans isomerase CYP19-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDP4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.