Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G405900.1 | Wheat | cytosol | 58.9 | 77.25 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 76.71 | 76.71 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 57.53 | 73.68 |
| EES04388 | Sorghum | cytosol | 55.25 | 70.76 |
| Zm00001d016661_P001 | Maize | plastid | 55.25 | 70.35 |
| Zm00001d016660_P001 | Maize | cytosol | 55.25 | 70.35 |
| EES05164 | Sorghum | cytosol | 55.25 | 70.35 |
| Zm00001d050635_P001 | Maize | plastid | 54.79 | 70.18 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 59.82 | 69.31 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 53.88 | 68.6 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 53.42 | 68.42 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 53.42 | 68.02 |
| Bra011568.1-P | Field mustard | cytosol | 52.97 | 67.84 |
| KRH51416 | Soybean | cytosol | 52.97 | 67.44 |
| PGSC0003DMT400004125 | Potato | extracellular | 52.51 | 67.25 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 52.51 | 66.86 |
| CDY22414 | Canola | cytosol, extracellular | 52.51 | 66.86 |
| Bra033574.1-P | Field mustard | cytosol | 52.51 | 66.86 |
| CDX72741 | Canola | cytosol | 52.51 | 66.86 |
| CDY47469 | Canola | cytosol | 52.05 | 66.67 |
| CDY26779 | Canola | cytosol | 52.05 | 66.67 |
| Bra037296.1-P | Field mustard | cytosol | 52.05 | 66.67 |
| CDX69094 | Canola | cytosol | 52.05 | 66.28 |
| Bra010728.1-P | Field mustard | cytosol | 52.05 | 66.28 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 52.05 | 66.28 |
| CDX90292 | Canola | cytosol | 52.05 | 66.28 |
| CDY12100 | Canola | cytosol | 52.05 | 66.28 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 52.05 | 66.28 |
| AT2G21130.1 | Thale cress | cytosol | 52.51 | 66.09 |
| PGSC0003DMT400011344 | Potato | cytosol | 51.6 | 65.7 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 51.6 | 65.7 |
| AT4G38740.1 | Thale cress | cytosol | 51.6 | 65.7 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 45.21 | 65.56 |
| AT4G34870.1 | Thale cress | cytosol | 50.68 | 64.53 |
| AT2G16600.1 | Thale cress | cytosol | 50.23 | 63.58 |
| TraesCS7B01G309500.2 | Wheat | mitochondrion | 47.03 | 47.25 |
| TraesCS5B01G478800.1 | Wheat | plastid | 40.18 | 44.44 |
| TraesCS5B01G329000.1 | Wheat | endoplasmic reticulum | 42.47 | 43.06 |
| TraesCS1B01G011100.1 | Wheat | plastid | 43.84 | 39.18 |
| TraesCS3B01G178000.1 | Wheat | plastid | 39.73 | 36.25 |
| TraesCS7B01G080700.1 | Wheat | cytosol | 43.84 | 25.26 |
| TraesCS6B01G343800.1 | Wheat | cytosol | 44.29 | 23.77 |
| TraesCS2B01G260600.1 | Wheat | nucleus | 41.55 | 14.33 |
| TraesCS6B01G208900.2 | Wheat | cytosol | 37.44 | 9.66 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR001810 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PFAM:PF00646 |
| PIRSF:PIRSF001467 | PRINTS:PR00153 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF403 | SMART:SM00256 |
| SUPFAM:SSF50891 | SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS6B01G450400 | EnsemblPlants:TraesCS6B01G450400.1 | TIGR:cd01926 | : |
Description
No Description!
Coordinates
chr6B:+:709133198..709133857
Molecular Weight (calculated)
24006.4 Da
IEP (calculated)
9.444
GRAVY (calculated)
-0.117
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETDRDGNG VCFPYDVLLD ILRRLPCRAV AKSRCVCRVW RALLDAHKPL PPMVFFDVTI GGAPAGRIVM ELFAKDVPKT AENFRALCTG EQGVGRNGKP
101: MHFKGSKFHR VIPGFICLSG DITKGNNTGS ESIYGDKFRD EKSVLKHTKP GMVSMANVGP NTNSSQFFIC TIPCQWLDGR HVVFGEVVKG MDVVRNIKKV
201: GTRSGMCAKS VIIADSGQL
101: MHFKGSKFHR VIPGFICLSG DITKGNNTGS ESIYGDKFRD EKSVLKHTKP GMVSMANVGP NTNSSQFFIC TIPCQWLDGR HVVFGEVVKG MDVVRNIKKV
201: GTRSGMCAKS VIIADSGQL
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.