Factsheet for Solyc06g051650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 6
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400016955	Potato	endoplasmic reticulum	97.33	95.63
Solyc06g076970.2.1	Tomato	nucleus	69.78	75.85
CDX72190	Canola	endoplasmic reticulum	68.44	68.75
VIT_13s0067g00870.t01	Wine grape	endoplasmic reticulum	69.33	68.42
Bra007200.1-P	Field mustard	endoplasmic reticulum	68.0	68.3
CDY27255	Canola	endoplasmic reticulum	68.0	68.3
Solyc01g111170.2.1	Tomato	extracellular, nucleus	51.56	67.84
AT3G55920.1	Thale cress	endoplasmic reticulum	68.0	67.11
Solyc10g054910.1.1	Tomato	extracellular, unclear	51.11	66.86
Solyc11g006070.1.1	Tomato	cytosol, extracellular, unclear	44.44	65.36
KRG97736	Soybean	endoplasmic reticulum	67.11	64.26
KRH31143	Soybean	endoplasmic reticulum	66.22	62.6
Solyc01g096520.2.1	Tomato	cytosol, nucleus, plastid	42.67	50.53
Solyc01g111360.2.1	Tomato	endoplasmic reticulum	47.56	46.93
Solyc01g009990.2.1	Tomato	plastid	49.78	45.16
Solyc01g108340.2.1	Tomato	cytosol	44.44	27.62
Solyc02g090480.2.1	Tomato	cytosol	40.44	25.21
Solyc09g065720.2.1	Tomato	nucleus	45.78	15.61
Solyc08g067090.2.1	Tomato	nucleus	37.78	10.51

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	ProteinID:AAW22880.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575
GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF384
UniProt:Q5GA61	SUPFAM:SSF50891	EnsemblPlantsGene:Solyc06g051650.2	EnsemblPlants:Solyc06g051650.2.1	TMHMM:TMhelix	UniParc:UPI00004C60FB
SEG:seg	:	:	:	:	:

Description

Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:Q5GA61]

Coordinates

chr6:+:35190354..35195046

Molecular Weight (calculated)

24471.3 Da

IEP (calculated)

9.420

GRAVY (calculated)

-0.319

Length

225 amino acids

Sequence
(BLAST)

001: MANRNKLSPS LVVWVLVLFG TLIFILNRLG DSGVSSDGKD IKIEAKTSED LERVTHKVYF DVEINGKPTG RIVMGLFGKT VPKTAENFRA LCTGEKGTGK
101: AGKPLHYKGS SFHRIIPSFM IQGGDFTRGD GRGGESIYGE SFPDENFDLK HTEPGILSMA NAGPDTNGSQ FFITTVTTSW LDKHHVVFGK VLSGMDVVHK
201: IEAEGRQSGT PKSKVRITNS GDLPQ

Best Arabidopsis Sequence Match ( AT5G58710.1 )
(BLAST)

001: MASSVTLLLW SLLLLGTLSA IQAKKSKENL KEITHKVYFD VEIDGKAAGR IVMGLFGKTV PKTVENFRAL CTGEKGIGKN GKALHYKGSS FHRIIPSFML
101: QGGDFTHGNG MGGESIYGEK FADENFKLKH TGPGFLSMAN AGQDTNGSQF FITTVTTSWL DGRHVVFGKV VTGMDVVYKV EAEGNQSGTP KSKVVIVDSG
201: ELPL

Arabidopsis Description

CYP20-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UBF4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.