CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034868.1-P	Field mustard	cytosol	100.0	100.0
CDY00993	Canola	cytosol	86.06	87.27
CDX73892	Canola	nucleus	85.46	84.12
CDY00721	Canola	nucleus	83.67	83.33
AT3G11070.1	Thale cress	nucleus	80.28	77.5
CDX70145	Canola	cytosol	68.13	65.02
CDX98848	Canola	cytosol	67.73	64.64
PGSC0003DMT400020747	Potato	mitochondrion	58.57	56.11
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	57.97	55.53
TraesCS2A01G102400.1	Wheat	mitochondrion	30.88	55.36
VIT_13s0067g01510.t01	Wine grape	cytosol	58.76	55.24
Zm00001d010590_P001	Maize	plasma membrane	56.77	54.08
EES19675	Sorghum	cytosol	56.37	53.4
Os05t0470800-01	Rice	mitochondrion	54.98	53.08
TraesCS1B01G305000.1	Wheat	cytosol	53.98	52.93
KRG97698	Soybean	nucleus	55.78	52.83
KRH31173	Soybean	nucleus	54.98	52.27
TraesCS1A01G296200.1	Wheat	cytosol	53.39	51.64
TraesCS1D01G295900.1	Wheat	cytosol	53.78	51.63
TraesCS2D01G101900.1	Wheat	cytosol	52.79	50.96
GSMUA_Achr5P14260_001	Banana	cytosol	54.38	50.93
TraesCS2B01G119500.1	Wheat	mitochondrion	50.2	50.7
TraesCS3B01G382000.1	Wheat	cytosol	52.99	50.47
Zm00001d012467_P001	Maize	plasma membrane	52.99	50.0
KRH73273	Soybean	nucleus	52.79	49.81
EES01699	Sorghum	cytosol	52.79	49.53
GSMUA_Achr4P18790_001	Banana	cytosol	54.58	49.46
TraesCS3A01G349400.1	Wheat	cytosol	51.79	49.43
TraesCS3D01G343400.1	Wheat	cytosol	51.39	49.24
KRH14921	Soybean	cytosol	51.59	48.41
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	29.28	46.23
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	53.78	46.15
HORVU3Hr1G087800.9	Barley	cytosol	52.79	46.01
TraesCS4B01G365800.1	Wheat	plastid	24.9	43.71
TraesCS5D01G158200.2	Wheat	cytosol	44.42	43.3
TraesCS5B01G151700.1	Wheat	cytosol	44.22	43.11
TraesCS5A01G152900.1	Wheat	cytosol	44.02	42.91
EES16490	Sorghum	cytosol	41.83	40.62
EES09088	Sorghum	cytosol	41.43	40.47
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	41.43	40.39

Protein Annotations

EnsemblPlants:CDY08552	EnsemblPlantsGene:GSBRNA2T00000335001	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:A0A078F633	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	ncoils:Coil	PANTHER:PTHR12815
PANTHER:PTHR12815:SF15	PFAM:PF01103	PFAM:PF07244	ProteinID:CDY08552	ProteinID:CDY08552.1	SEG:seg
UniParc:UPI0002547750	UniProt:A0A078F633	MapMan:23.2.2.1	:	:	:

Description

BnaA05g27880DBnaA05g27880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F633]

Coordinates

chrLK031986:-:688477..690824

Molecular Weight (calculated)

55771.5 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.375

Length

502 amino acids

Sequence
(BLAST)

001: MANPTENLDP NPPTREPEDE LEELNGDEGE LEEEEEDEED TVSNAYRTKT ESLFRRMRSA PVPVRVHDVI VKGNSKTKDH IIEAEVEAVI REANTLQELL
101: EASRVANSNL RALDIFDSVN ITLDSGPPEL PGTTNVVIEV VESKHPLTGQ IGAYTRAEAK SSSVEASLKY KNFFGYGDIW DGSMVYGLDS SAEVGLGMYL
201: PRLKGLPTPF SSRLYLSTQD WLKFSSYKER SLGLSLGLLS SKYHELVYTV AWRSLIDPSR LASESIRRQL GHSLLSALKY TFKYDQRDSY LRPTSGYAFS
301: STSQIGGLAP DSRSLRFFKQ EIDLRCAVPL GFYRAALNFG VSGGVSFPWG SGYRNRASSV PERFFLGGNS SPVCSLSGPS ALWGFSTRGL GPNEARRKGD
401: VERDFVGGDA AVTAFADLSF DLPVRWLRER GVHGHVFACA GNTAKLTENE FRNLSAPKFM ETFRTSVGAG IVLPVSLFRM ELEESYHQPC RNFWQNLQFQ
501: AV

Best Arabidopsis Sequence Match ( AT3G11070.1 )
(BLAST)

001: MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRL6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.