Factsheet for Os05t0470800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

mitochondrion: 19010998
mitochondrion: 23027867
plasma membrane: 27800704

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010590_P001	Maize	plasma membrane	81.73	80.65
EES19675	Sorghum	cytosol	82.12	80.57
TraesCS2D01G101900.1	Wheat	cytosol	80.38	80.38
TraesCS2A01G102400.1	Wheat	mitochondrion	43.08	80.0
TraesCS1B01G305000.1	Wheat	cytosol	78.27	79.49
TraesCS1A01G296200.1	Wheat	cytosol	79.23	79.38
TraesCS1D01G295900.1	Wheat	cytosol	79.62	79.16
TraesCS2B01G119500.1	Wheat	mitochondrion	72.5	75.86
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	80.38	71.45
GSMUA_Achr5P14260_001	Banana	cytosol	64.42	62.5
PGSC0003DMT400020747	Potato	mitochondrion	62.5	62.02
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	61.92	61.45
VIT_13s0067g01510.t01	Wine grape	cytosol	60.77	59.18
GSMUA_Achr4P18790_001	Banana	cytosol	62.88	59.03
CDY00993	Canola	cytosol	54.81	57.58
KRG97698	Soybean	nucleus	57.12	56.04
KRH31173	Soybean	nucleus	56.73	55.87
CDY00721	Canola	nucleus	54.04	55.75
AT5G05520.1	Thale cress	cytosol	55.96	55.53
Bra034868.1-P	Field mustard	cytosol	53.08	54.98
CDY08552	Canola	cytosol	53.08	54.98
AT3G11070.1	Thale cress	nucleus	54.81	54.81
CDX73892	Canola	nucleus	53.65	54.71
Bra001389.1-P	Field mustard	nucleus	53.46	54.51
KRH73273	Soybean	nucleus	55.19	53.95
Bra009118.1-P	Field mustard	nucleus	52.88	52.18
CDX70145	Canola	cytosol	52.69	52.09
KRH14921	Soybean	cytosol	53.46	51.96
CDX98848	Canola	cytosol	52.5	51.9

Protein Annotations

Gene3D:2.40.160.50	MapMan:23.2.2.1	Gene3D:3.10.20.310	EntrezGene:4339073	ProteinID:AAT93950.1	ProteinID:AAT94010.1
ProteinID:BAF17724.1	ProteinID:BAS94488.1	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	ncoils:Coil	ProteinID:EEE64052.1
GO:GO:0005575	GO:GO:0016020	GO:GO:0019867	EnsemblPlantsGene:Os05g0470800	EnsemblPlants:Os05t0470800-01	PFAM:PF01103
PFAM:PF07244	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	UniProt:Q6ATX4	UniParc:UPI000040364C	RefSeq:XP_015639661.1
SEG:seg	:	:	:	:	:

Description

Bacterial surface antigen (D15) family protein. (Os05t0470800-01)

Coordinates

chr5:-:23104197..23109864

Molecular Weight (calculated)

56371.4 Da

IEP (calculated)

5.714

GRAVY (calculated)

-0.212

Length

520 amino acids

Sequence
(BLAST)

001: MATAADQNPN DAEHREAAAG ANAAAEEYEE EDEEEEEVEL DGPAAVAAER EKVQAVFKRL SSDPVGIRVH DVIIKGNAKT KEELIEAEVA ELLRAAPTVQ
101: DLLRNASIAS ARLRQLDVFD SVNITLDAGP PELPGTTNVV VEVVEAANPI TGSAGVYSKP EARSWSLEGS VKLKNLFGYG DIWDASGAYS WDQTSEVGIG
201: VSLPRFKSIS TPLMARASLS SQDWLKFSSY KERLLGLSFG LISTMQHDLS YNLTWRTLTD PSQVSSKSIR RQLGHNLLSA LKYTYKIDQR NSHLRPTKGY
301: AFLSTSQVGG LWDSKGLRFF RQEFDVRGAV PLGFYNSALN VGLGVGAILP LGRGFMNLSS SVPDRFYLGG HSSPVCSLSG LSSLLGFRTR GIGPTEPRRL
401: VPSESEDGSA ASPGRDYLGG DLAVSAFADL SFDLPLKIFR DAGIHGHAFL TAGNLAKLSE GEYKKFSLSE FGRTFRSSAG VGIILPTKLF RVEVNYCYIL
501: KQAEHDSGRT GIQFSFSSPL

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.