CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010590_P001	Maize	plasma membrane	92.83	93.36
Os05t0470800-01	Rice	mitochondrion	80.57	82.12
TraesCS1D01G295900.1	Wheat	cytosol	76.79	77.82
TraesCS2D01G101900.1	Wheat	cytosol	76.23	77.69
TraesCS1A01G296200.1	Wheat	cytosol	76.04	77.65
TraesCS1B01G305000.1	Wheat	cytosol	74.91	77.54
TraesCS2A01G102400.1	Wheat	mitochondrion	40.94	77.5
TraesCS2B01G119500.1	Wheat	mitochondrion	69.43	74.04
EES01699	Sorghum	cytosol	71.89	71.22
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	78.49	71.11
GSMUA_Achr5P14260_001	Banana	cytosol	65.66	64.93
GSMUA_Achr4P18790_001	Banana	cytosol	64.15	61.37
PGSC0003DMT400020747	Potato	mitochondrion	60.38	61.07
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	58.87	59.54
VIT_13s0067g01510.t01	Wine grape	cytosol	59.43	58.99
CDY00993	Canola	cytosol	54.91	58.79
CDY00721	Canola	nucleus	55.66	58.53
CDX73892	Canola	nucleus	55.09	57.25
Bra001389.1-P	Field mustard	nucleus	55.09	57.25
AT5G05520.1	Thale cress	cytosol	55.85	56.49
CDY08552	Canola	cytosol	53.4	56.37
Bra034868.1-P	Field mustard	cytosol	53.4	56.37
KRG97698	Soybean	nucleus	54.53	54.53
KRH31173	Soybean	nucleus	54.15	54.36
AT3G11070.1	Thale cress	nucleus	53.02	54.04
Bra009118.1-P	Field mustard	nucleus	53.58	53.89
CDX70145	Canola	cytosol	53.02	53.42
CDX98848	Canola	cytosol	52.64	53.04
KRH73273	Soybean	nucleus	52.45	52.26
EES09088	Sorghum	cytosol	49.43	50.97
KRH14921	Soybean	cytosol	50.94	50.47
EES16490	Sorghum	cytosol	48.87	50.1

Protein Annotations

EnsemblPlants:EES19675	EnsemblPlantsGene:SORBI_3009G169200	EntrezGene:8076984	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15
PFAM:PF01103	PFAM:PF07244	ProteinID:EES19675	ProteinID:EES19675.1	RefSeq:XP_002441245.1	SEG:seg
unigene:Sbi.9654	UniParc:UPI0001A88E79	UniProt:C5YZE7	MapMan:23.2.2.1	:	:

Description

hypothetical protein

Coordinates

chr9:-:52522380..52527019

Molecular Weight (calculated)

57835.9 Da

IEP (calculated)

5.524

GRAVY (calculated)

-0.311

Length

530 amino acids

Sequence
(BLAST)

001: MAAAADSAAG QNPKDDERHV LTADSDARFS EEEYEEDGEE EYEEEEEEEE LDGPAAEAAE RERVQSVFRR LSSNPVGIRV HDVLIKGNTK TRDELIEAEV
101: ADLLRAAPTV QDLLRAASVA TARLHSLDVF DTVKITLDAG PPELPGTTNV VIEVVEAANP LTGTAGVYSK PEARSWSLEG SLKLKNLFGY GDIWDASGSF
201: GWDQTTEVGV GVYLPRFKSI PTPLMARASL SSQDWLKFSS YKERLLGLSF GLLSTRNHDL SYNLTWRTLT DPSHVSSKAI RRQLGHNLLS ALKYIYKIDK
301: RDSHLRPTKG YAFQSTSQVG GLWNSKGLRY FRQEFDVRGA VPLGFYNAAL NVGVGAGVIL PLGGGFMNST SPVPERFYLG GNSSPVCSLG GLSSLLGFRL
401: RGVGPTEARR HVLDKPESGS GDPGRDYLGG DLAVSAFADL SFDLPLKIFR DAGIHGHAFL TAGNLAKLSE GEYKNFTASE FQRTFRSSAG VGIILPTKLF
501: RVEVNYCHIL KQAEHDSSKT GIQFSFSSPM

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.