CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73273	Soybean	nucleus	92.9	93.42
KRH31173	Soybean	nucleus	75.51	76.52
KRG97698	Soybean	nucleus	74.95	75.66
VIT_13s0067g01510.t01	Wine grape	cytosol	58.13	58.24
TraesCS2A01G102400.1	Wheat	mitochondrion	29.91	57.14
PGSC0003DMT400020747	Potato	mitochondrion	55.14	56.3
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	54.21	55.34
Bra001389.1-P	Field mustard	nucleus	52.71	55.29
CDX73892	Canola	nucleus	52.34	54.9
CDY00721	Canola	nucleus	51.4	54.56
CDY00993	Canola	cytosol	49.91	53.94
Os05t0470800-01	Rice	mitochondrion	51.96	53.46
AT5G05520.1	Thale cress	cytosol	52.34	53.44
GSMUA_Achr5P14260_001	Banana	cytosol	53.27	53.17
TraesCS1A01G296200.1	Wheat	cytosol	50.84	52.41
TraesCS1B01G305000.1	Wheat	cytosol	50.09	52.34
TraesCS1D01G295900.1	Wheat	cytosol	50.84	52.01
AT3G11070.1	Thale cress	nucleus	50.47	51.92
TraesCS2D01G101900.1	Wheat	cytosol	50.47	51.92
CDY08552	Canola	cytosol	48.41	51.59
Bra034868.1-P	Field mustard	cytosol	48.41	51.59
CDX98848	Canola	cytosol	50.65	51.52
TraesCS2B01G119500.1	Wheat	mitochondrion	47.48	51.11
EES19675	Sorghum	cytosol	50.47	50.94
Zm00001d010590_P001	Maize	plasma membrane	50.09	50.85
CDX70145	Canola	cytosol	49.53	50.38
Bra009118.1-P	Field mustard	nucleus	49.35	50.09
EES01699	Sorghum	cytosol	49.91	49.91
GSMUA_Achr4P18790_001	Banana	cytosol	51.59	49.82
Zm00001d012467_P001	Maize	plasma membrane	49.35	49.62
TraesCS3A01G349400.1	Wheat	cytosol	47.85	48.67
TraesCS3B01G382000.1	Wheat	cytosol	47.66	48.39
TraesCS3D01G343400.1	Wheat	cytosol	47.1	48.09
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	28.04	47.17
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	50.84	46.5
HORVU3Hr1G087800.9	Barley	cytosol	48.22	44.79
TraesCS4B01G365800.1	Wheat	plastid	23.55	44.06
TraesCS5A01G152900.1	Wheat	cytosol	42.24	43.88
TraesCS5D01G158200.2	Wheat	cytosol	42.24	43.88
TraesCS5B01G151700.1	Wheat	cytosol	42.06	43.69
EES09088	Sorghum	cytosol	41.12	42.8
EES16490	Sorghum	cytosol	40.19	41.59
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	39.63	41.16

Protein Annotations

EMBL:ACUP02008543	EnsemblPlants:KRH14921	EnsemblPlantsGene:GLYMA_14G057500	EntrezGene:100776589	Gene3D:2.40.160.50	Gene3D:3.10.20.310
GO:GO:0005575	GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	PANTHER:PTHR12815
PANTHER:PTHR12815:SF15	PFAM:PF01103	PFAM:PF07244	ProteinID:KRH14921	ProteinID:KRH14921.1	SEG:seg
UniParc:UPI000233B554	UniProt:I1M7R6	MapMan:23.2.2.1	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:4593631..4597706

Molecular Weight (calculated)

59718.3 Da

IEP (calculated)

6.916

GRAVY (calculated)

-0.475

Length

535 amino acids

Sequence
(BLAST)

001: MTNTEEEEAT PPNPKNYTQH STNDDVEPRD DEDIEEDQEN DEDDVVQEPN RGIPQSAASK LREQRFKVET LSRRLSSELV PIRVHDVVIN GNTKTKDWVI
101: EAELKGIENA TSMQELMQAS QIAIAKLQGL EIFDSCMVRL EAGPRELPNT ANVIVDVVET DNKVSGEFGI YTKPSTSSWT AEGALKYKNL LGYGDLCDAS
201: LAYGANQATE VSVGVYAPRV KGFLTPIVTR ISMLSQDWQE SSSYKERLLG AYLGLISTKH HDLAYTLGWR TLTDPSKKSS RSIRRQLGHG LVSSLKYTFK
301: IDRRNSTIRP TKGYVFLSTT HVGGLTLDPR SLRFLRQEFD VRFSVPFGFY NTALNLGISA GAVFPWGNGF KTKPSPLPER FYLGGDFSPV CTLGGPTTLW
401: GFKTRGLGPT EPRRQNRDGS NDDNVDSSGW DFIGGDFAVT AFADLSFDLP IMWLREHGIH GHVFAGSGNA AKLTKNEYKH FSPRKFLESF RMSVGCGVVI
501: PTRLFRLEGN YFYILRKGEH DRGKTGFRFS FSAPS

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.