Factsheet for Bra001389.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73892	Canola	nucleus	99.02	99.02
Bra034868.1-P	Field mustard	cytosol	84.31	85.66
AT3G11070.1	Thale cress	nucleus	82.75	81.15
Bra009118.1-P	Field mustard	nucleus	69.8	67.55
PGSC0003DMT400020747	Potato	mitochondrion	59.22	57.63
VIT_13s0067g01510.t01	Wine grape	cytosol	60.0	57.3
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	58.04	56.49
KRH31173	Soybean	nucleus	57.84	55.87
KRG97698	Soybean	nucleus	58.04	55.85
EES19675	Sorghum	cytosol	57.25	55.09
TraesCS2A01G102400.1	Wheat	mitochondrion	29.8	54.29
Zm00001d010590_P001	Maize	plasma membrane	55.88	54.08
TraesCS1B01G305000.1	Wheat	cytosol	53.92	53.71
KRH73273	Soybean	nucleus	55.88	53.57
Os05t0470800-01	Rice	mitochondrion	54.51	53.46
GSMUA_Achr5P14260_001	Banana	cytosol	55.69	52.99
KRH14921	Soybean	cytosol	55.29	52.71
TraesCS1A01G296200.1	Wheat	cytosol	53.53	52.6
Zm00001d012467_P001	Maize	plasma membrane	54.71	52.44
TraesCS1D01G295900.1	Wheat	cytosol	53.73	52.39
TraesCS3B01G382000.1	Wheat	cytosol	53.92	52.18
TraesCS3A01G349400.1	Wheat	cytosol	53.73	52.09
EES01699	Sorghum	cytosol	54.31	51.78
GSMUA_Achr4P18790_001	Banana	cytosol	55.88	51.44
TraesCS2D01G101900.1	Wheat	cytosol	52.35	51.35
TraesCS2B01G119500.1	Wheat	mitochondrion	49.8	51.11
TraesCS3D01G343400.1	Wheat	cytosol	52.16	50.76
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	29.8	47.8
HORVU3Hr1G087800.9	Barley	cytosol	53.53	47.4
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	53.73	46.84
TraesCS4B01G365800.1	Wheat	plastid	26.08	46.5
TraesCS5D01G158200.2	Wheat	cytosol	44.9	44.47
TraesCS5B01G151700.1	Wheat	cytosol	44.51	44.08
TraesCS5A01G152900.1	Wheat	cytosol	44.31	43.88
EES09088	Sorghum	cytosol	42.94	42.61
EES16490	Sorghum	cytosol	42.75	42.17
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	42.16	41.75

Protein Annotations

EnsemblPlants:Bra001389.1	EnsemblPlants:Bra001389.1-P	EnsemblPlantsGene:Bra001389	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15
PFAM:PF01103	PFAM:PF07244	SEG:seg	UniParc:UPI00025406AE	UniProt:M4CB10	MapMan:23.2.2.1

Description

AT3G11070 (E=4e-230) | outer membrane OMP85 family protein

Coordinates

chrA03:-:16130775..16133082

Molecular Weight (calculated)

56228.9 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.430

Length

510 amino acids

Sequence
(BLAST)

001: MANPTENLDP NPPTREPEDE VEELNGDEGE VEEEEEDDDE GEDDDAVSNP QSLKTESLFR RMRSSPVPVR VHDVIVKGNT KTKDHIIEAE VDGVREASTL
101: QELLEASRVA NSNLRALDVF DSVNVTLDSG PPELPGTTNV IIEVVESKSP LTGQIGAYTR AEAKSSSVEA SLKYKNIFGY GDIWDGSVIY GCDNSAEVGM
201: GMYLPRFKGL PTPFSSRLYL STQDWLNFSS YKERSLGLSL GLLSSKYHEL VYTVGWRNLI DPSRSASKSI RRQLGHSLLS ALKYTFKYDQ RDSYLRPTSG
301: YAFSSTSQIG GLAPDSRSLR FLKQEIDLRC AFPFGFYNAA LNLGVSGGVT FPWGSGYQNR PSSVPERFFL GGNSSPVCSL GGPSALWGFK TRGLGPNEPK
401: RKGDDERDFI GGDAAVTAFA DLSFDLPVRW LRERGVHGHV FACGGNMAKL TENEFRNVTA PKLLETFRTS VGAGIVLPTS LFRMEINYCH ILKKQEHDKA
501: KSGFFLTFSA

Best Arabidopsis Sequence Match ( AT3G11070.1 )
(BLAST)

001: MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRL6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.