CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09088	Sorghum	cytosol	90.52	91.05
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	85.3	85.63
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	51.64	83.96
TraesCS5D01G158200.2	Wheat	cytosol	73.5	73.79
TraesCS5B01G151700.1	Wheat	cytosol	72.92	73.2
TraesCS5A01G152900.1	Wheat	cytosol	72.73	73.01
EES19675	Sorghum	cytosol	50.1	48.87
GSMUA_Achr4P18790_001	Banana	cytosol	50.87	47.47
GSMUA_Achr5P14260_001	Banana	cytosol	48.94	47.2
PGSC0003DMT400020747	Potato	mitochondrion	47.0	46.37
VIT_13s0067g01510.t01	Wine grape	cytosol	47.78	46.25
EES01699	Sorghum	cytosol	47.78	46.17
KRG97698	Soybean	nucleus	46.42	45.28
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	45.84	45.23
KRH31173	Soybean	nucleus	45.45	44.51
CDX73892	Canola	nucleus	42.55	43.14
CDY00721	Canola	nucleus	41.97	43.06
CDY00993	Canola	cytosol	41.01	42.83
Bra001389.1-P	Field mustard	nucleus	42.17	42.75
AT5G05520.1	Thale cress	cytosol	43.13	42.56
KRH73273	Soybean	nucleus	43.71	42.48
AT3G11070.1	Thale cress	nucleus	42.36	42.12
Bra034868.1-P	Field mustard	cytosol	40.62	41.83
CDY08552	Canola	cytosol	40.62	41.83
CDX98848	Canola	cytosol	41.97	41.25
Bra009118.1-P	Field mustard	nucleus	41.97	41.18
CDX70145	Canola	cytosol	41.78	41.06
KRH14921	Soybean	cytosol	41.59	40.19

Protein Annotations

EnsemblPlants:EES16490	EnsemblPlantsGene:SORBI_3008G004300	EntrezGene:8070321	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020
GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	ProteinID:EES16490
ProteinID:EES16490.1	RefSeq:XP_002442652.1	SEG:seg	unigene:Sbi.6385	UniParc:UPI0001A8834F	UniProt:C5YQ21
MapMan:23.2.2.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:397390..400235

Molecular Weight (calculated)

55603.7 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.158

Length

517 amino acids

Sequence
(BLAST)

001: MAAASDSTHP PPDLDVDDDD EEFDDDDDDD LDDEADDSEP SASSSEAARL EAVLRRLTAD EVRIRVHQVT IRGCARTRRA AVEAAVGPDL RRAATVRDLV
101: RAAAAAGDRL RRLGAFDTVS ITLDAAPPGI PGSAVVVVVD VAEARGRAAG DFGVFANTQT RSCSLEGSVK LINLFGFCET WDASGALELD KTAELSAGVQ
201: MPRIGAIPTP LLARISFLSD DWLKSSLKEH LMGVSVGLLS TMNHNLAYNM TWRKLTDPTR MSSNSVQEEL GHSLLSSIKY AYKVDQRDSS IRPTRGYAFL
301: SSSLVGGLAP GSKYSRFLRQ EFDLRVALPL GVLNGALNAG VAAGVIHPLE RGSTGTVSPL SERFYLGGNR PLVCRLGGPS SLLGFKTRGL GATEFRAHDP
401: NNSDNGTSTS PELNGLGGDL AVTAFADLSF DLPLKPLRDL GIHGHAFVCA GNLVKLTDYD LRKFPVTDFL QTFRSSAGFG VVLPTRLFRI EMNYCYILKQ
501: LDHDRGKSGI QFNFSSP

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.