Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G151700.1 | Wheat | cytosol | 97.67 | 97.67 |
| TraesCS5D01G158200.2 | Wheat | cytosol | 97.48 | 97.48 |
| EES09088 | Sorghum | cytosol | 74.37 | 74.51 |
| EES16490 | Sorghum | cytosol | 73.01 | 72.73 |
| Zm00001d041347_P001 | Maize | cytosol, peroxisome, plastid | 43.69 | 70.75 |
| Zm00001d023220_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 70.49 | 70.49 |
| TraesCS2A01G102400.1 | Wheat | mitochondrion | 31.07 | 57.14 |
| TraesCS1A01G296200.1 | Wheat | cytosol | 50.1 | 49.71 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 50.1 | 48.13 |
| TraesCS3A01G349400.1 | Wheat | cytosol | 48.93 | 47.91 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 50.87 | 47.29 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 46.41 | 45.61 |
| CDY00993 | Canola | cytosol | 43.69 | 45.45 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 46.99 | 45.32 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 45.63 | 44.85 |
| KRH31173 | Soybean | nucleus | 45.63 | 44.51 |
| Bra001389.1-P | Field mustard | nucleus | 43.88 | 44.31 |
| CDX73892 | Canola | nucleus | 43.88 | 44.31 |
| KRG97698 | Soybean | nucleus | 45.44 | 44.15 |
| CDY08552 | Canola | cytosol | 42.91 | 44.02 |
| Bra034868.1-P | Field mustard | cytosol | 42.91 | 44.02 |
| AT5G05520.1 | Thale cress | cytosol | 44.27 | 43.51 |
| CDY00721 | Canola | nucleus | 42.52 | 43.45 |
| KRH73273 | Soybean | nucleus | 44.85 | 43.42 |
| AT3G11070.1 | Thale cress | nucleus | 42.91 | 42.5 |
| KRH14921 | Soybean | cytosol | 43.88 | 42.24 |
| Bra009118.1-P | Field mustard | nucleus | 42.33 | 41.37 |
| CDX70145 | Canola | cytosol | 42.14 | 41.25 |
| CDX98848 | Canola | cytosol | 42.14 | 41.25 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G152900.1 | EnsemblPlantsGene:TraesCS5A01G152900 | Gene3D:2.40.160.50 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0019867 |
| InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | PFAM:PF01103 | SEG:seg | MapMan:23.2.2.1 |
Description
No Description!
Coordinates
chr5A:+:330191542..330194234
Molecular Weight (calculated)
55627.7 Da
IEP (calculated)
6.364
GRAVY (calculated)
-0.196
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTASKYPQ HYDDDEDDDD EFEDDDDDDE PSRPLPAGSA EDRLEAVLRR LTADEVRIRV HDVAIRGCAR TRRAAAEAAV GQDLARAATV PELLRAAAAA
101: GERLRRLGAF ESVSITLDTA PPGVPADARG GAVVVLVDVT EARGRAAGGL GVFANTETRS CSVEGSLRFK NLFGYCETWD ASGLLGLDQT MELSVGALIP
201: RIGPIPTPLM ARVSFLSEDW LKSSLREHLM GVSVGLLSTM NHNLAYNLSW KTIIDPARLS SSSIRDQLEH SLLSSIKYTY KIDQRDSSIR PTRGYAFLSS
301: SQVGGLAPDS KNTRFVRQEF DLRVAMPLGV WNGALNAGVA AGFIHPLATG SAGSISSLRE RFYLGGNKSL VCRLGGPSSL LGFKSRGLGP TDSQACAPKN
401: SENAAPSSPE LDALGGDIAV TAFADLSFDL PLKPLREFGI HGHAFVSAGN HAKFTERDIR RFSVTEFLKT FRSSAGFGVV VPTRLFRIEM NYCHILKQFD
501: NDRAKTGIQF NFSSP
101: GERLRRLGAF ESVSITLDTA PPGVPADARG GAVVVLVDVT EARGRAAGGL GVFANTETRS CSVEGSLRFK NLFGYCETWD ASGLLGLDQT MELSVGALIP
201: RIGPIPTPLM ARVSFLSEDW LKSSLREHLM GVSVGLLSTM NHNLAYNLSW KTIIDPARLS SSSIRDQLEH SLLSSIKYTY KIDQRDSSIR PTRGYAFLSS
301: SQVGGLAPDS KNTRFVRQEF DLRVAMPLGV WNGALNAGVA AGFIHPLATG SAGSISSLRE RFYLGGNKSL VCRLGGPSSL LGFKSRGLGP TDSQACAPKN
401: SENAAPSSPE LDALGGDIAV TAFADLSFDL PLKPLREFGI HGHAFVSAGN HAKFTERDIR RFSVTEFLKT FRSSAGFGVV VPTRLFRIEM NYCHILKQFD
501: NDRAKTGIQF NFSSP
001: MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS
Arabidopsis Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRL6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.