Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G382000.1 | Wheat | cytosol | 94.49 | 94.31 |
| TraesCS3D01G343400.1 | Wheat | cytosol | 85.74 | 86.07 |
| HORVU3Hr1G087800.9 | Barley | cytosol | 83.46 | 76.22 |
| TraesCS2A01G102400.1 | Wheat | mitochondrion | 39.16 | 73.57 |
| Zm00001d012467_P001 | Maize | plasma membrane | 68.63 | 67.86 |
| EES01699 | Sorghum | cytosol | 66.16 | 65.05 |
| TraesCS1A01G296200.1 | Wheat | cytosol | 63.88 | 64.74 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 57.03 | 55.97 |
| CDY00721 | Canola | nucleus | 52.09 | 54.37 |
| CDY00993 | Canola | cytosol | 50.95 | 54.14 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 53.61 | 53.82 |
| Bra001389.1-P | Field mustard | nucleus | 52.09 | 53.73 |
| CDX73892 | Canola | nucleus | 51.9 | 53.53 |
| AT3G11070.1 | Thale cress | nucleus | 52.66 | 53.27 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 53.99 | 53.18 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 52.66 | 52.86 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 55.13 | 52.35 |
| AT5G05520.1 | Thale cress | cytosol | 51.71 | 51.91 |
| Bra034868.1-P | Field mustard | cytosol | 49.43 | 51.79 |
| CDY08552 | Canola | cytosol | 49.43 | 51.79 |
| KRH31173 | Soybean | nucleus | 51.14 | 50.95 |
| KRG97698 | Soybean | nucleus | 50.57 | 50.19 |
| TraesCS5A01G152900.1 | Wheat | cytosol | 47.91 | 48.93 |
| KRH73273 | Soybean | nucleus | 49.43 | 48.87 |
| Bra009118.1-P | Field mustard | nucleus | 48.86 | 48.77 |
| CDX98848 | Canola | cytosol | 48.48 | 48.48 |
| CDX70145 | Canola | cytosol | 48.48 | 48.48 |
| KRH14921 | Soybean | cytosol | 48.67 | 47.85 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G349400.1 | EnsemblPlantsGene:TraesCS3A01G349400 | Gene3D:2.40.160.50 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0019867 |
| InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | PFAM:PF01103 | SEG:seg | MapMan:23.2.2.1 |
Description
No Description!
Coordinates
chr3A:+:598542722..598548057
Molecular Weight (calculated)
57969.8 Da
IEP (calculated)
7.190
GRAVY (calculated)
-0.227
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAADSTAE QAPNPAPHEP SDEPRKAPDQ PDRGEDNGVD FDEEDDPEEL DGPAAYKEKV KAVFRRLHAE PVRIRVHDVI IRGNFKTRGS LIEAEVGDLL
101: RSPGTVQGLV RASSHANALL RRLDVFDSVS ITLDAGPPGF PGTANVTIQV VEAARPYNRG IFFFPKKEVI SWPVEGWFML KNLFGYGDMW DVSGEYGWDQ
201: SSKIDIGVYL PRLKSIPTPL TARASILSED WLKFSSYKER LLGLKFGLLS TWHHNLSYDL AWRTLTDPSQ MASESIRRQL GHNLLSALSY AYKIDKRDSE
301: FRPTKGYAFV STSQVGGLWK NGLRFFRQGF NVRGAVPFGF CNAALNVGIS AGVILPLSRG FMELPSPVPD RFYLGGLSSP VCSLGVISSL LGFKTRGVGP
401: SEPQRSVPGE SVTVDAAAST GRDYLGGDLA VSAFADLSFD LPLKLFRDNG IHGHAFLCAG NLAKLSEGEF KNFSFPEFRR TFRSSAGVGI VFPTSLFRME
501: LNYCHILKKH EHDHGKSGIQ FSFSLE
101: RSPGTVQGLV RASSHANALL RRLDVFDSVS ITLDAGPPGF PGTANVTIQV VEAARPYNRG IFFFPKKEVI SWPVEGWFML KNLFGYGDMW DVSGEYGWDQ
201: SSKIDIGVYL PRLKSIPTPL TARASILSED WLKFSSYKER LLGLKFGLLS TWHHNLSYDL AWRTLTDPSQ MASESIRRQL GHNLLSALSY AYKIDKRDSE
301: FRPTKGYAFV STSQVGGLWK NGLRFFRQGF NVRGAVPFGF CNAALNVGIS AGVILPLSRG FMELPSPVPD RFYLGGLSSP VCSLGVISSL LGFKTRGVGP
401: SEPQRSVPGE SVTVDAAAST GRDYLGGDLA VSAFADLSFD LPLKLFRDNG IHGHAFLCAG NLAKLSEGEF KNFSFPEFRR TFRSSAGVGI VFPTSLFRME
501: LNYCHILKKH EHDHGKSGIQ FSFSLE
001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
Arabidopsis Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.