Factsheet for TraesCS2A01G102400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G119500.1	Wheat	mitochondrion	92.14	51.91
TraesCS2D01G101900.1	Wheat	cytosol	92.5	49.81
TraesCS1A01G296200.1	Wheat	cytosol	90.36	48.75
Os05t0470800-01	Rice	mitochondrion	80.0	43.08
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	89.64	42.91
Zm00001d010590_P001	Maize	plasma membrane	78.57	41.75
EES19675	Sorghum	cytosol	77.5	40.94
TraesCS3A01G349400.1	Wheat	cytosol	73.57	39.16
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	61.43	32.82
PGSC0003DMT400020747	Potato	mitochondrion	60.71	32.44
CDY00993	Canola	cytosol	56.43	31.92
GSMUA_Achr5P14260_001	Banana	cytosol	61.07	31.9
KRG97698	Soybean	nucleus	60.0	31.7
GSMUA_Achr4P18790_001	Banana	cytosol	62.5	31.59
TraesCS5A01G152900.1	Wheat	cytosol	57.14	31.07
KRH73273	Soybean	nucleus	58.93	31.02
Bra034868.1-P	Field mustard	cytosol	55.36	30.88
CDY08552	Canola	cytosol	55.36	30.88
KRH31173	Soybean	nucleus	58.21	30.87
CDY00721	Canola	nucleus	55.0	30.56
VIT_13s0067g01510.t01	Wine grape	cytosol	57.5	30.15
CDX73892	Canola	nucleus	54.64	30.0
KRH14921	Soybean	cytosol	57.14	29.91
Bra001389.1-P	Field mustard	nucleus	54.29	29.8
AT3G11070.1	Thale cress	nucleus	53.93	29.04
AT5G05520.1	Thale cress	cytosol	54.29	29.01
CDX70145	Canola	cytosol	50.71	27.0
CDX98848	Canola	cytosol	50.71	27.0
Bra009118.1-P	Field mustard	nucleus	50.71	26.95

Protein Annotations

EnsemblPlants:TraesCS2A01G102400.1	EnsemblPlantsGene:TraesCS2A01G102400	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020	GO:GO:0019867
InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	SEG:seg	MapMan:23.2.2.1

Description

No Description!

Coordinates

chr2A:-:55863426..55864547

Molecular Weight (calculated)

30583.5 Da

IEP (calculated)

10.102

GRAVY (calculated)

-0.099

Length

280 amino acids

Sequence
(BLAST)

001: MARASLLSQD WMKFSSYKER LLGLSFGLLS TRHHDLSYNL TWRTLTDPSR LASASIRRQL GHNLLSALKY TYKIDQRDSH IRPTKGYAFL SSSQVGGLWD
101: NKGLNFFRQE FDVRGALPFG FWNAALNVGV GAGVVLPLAR GFMNSSTPVT DRFNLGGHSS PVCSLGGISS LLGFRTRGVG PTEARRLVPG ESEDGSAAVP
201: GRDYLGGDLA VSAFADLSFD LPLKVFRDAG IHGHAFLTAG NLVKLSEGQY KNFSLDEFRR SLGVVLELAL FCRLNCSGSR

Best Arabidopsis Sequence Match ( AT3G11070.1 )
(BLAST)

001: MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRL6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.