Factsheet for Zm00001d010590_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19675	Sorghum	cytosol	93.36	92.83
Os05t0470800-01	Rice	mitochondrion	80.65	81.73
TraesCS2A01G102400.1	Wheat	mitochondrion	41.75	78.57
TraesCS2D01G101900.1	Wheat	cytosol	76.85	77.88
TraesCS1D01G295900.1	Wheat	cytosol	77.23	77.82
TraesCS1A01G296200.1	Wheat	cytosol	76.47	77.65
TraesCS1B01G305000.1	Wheat	cytosol	75.14	77.34
TraesCS2B01G119500.1	Wheat	mitochondrion	70.4	74.65
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	78.37	70.6
Zm00001d012467_P001	Maize	plasma membrane	69.45	68.8
GSMUA_Achr5P14260_001	Banana	cytosol	64.52	63.43
PGSC0003DMT400020747	Potato	mitochondrion	61.48	61.83
GSMUA_Achr4P18790_001	Banana	cytosol	64.71	61.55
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	60.34	60.69
CDY00993	Canola	cytosol	55.6	59.19
VIT_13s0067g01510.t01	Wine grape	cytosol	59.77	58.99
CDY00721	Canola	nucleus	55.6	58.13
CDY08552	Canola	cytosol	54.08	56.77
Bra034868.1-P	Field mustard	cytosol	54.08	56.77
AT5G05520.1	Thale cress	cytosol	56.17	56.49
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	33.97	56.29
CDX73892	Canola	nucleus	54.08	55.88
Bra001389.1-P	Field mustard	nucleus	54.08	55.88
Bra009118.1-P	Field mustard	nucleus	54.46	54.46
AT3G11070.1	Thale cress	nucleus	53.51	54.23
CDX70145	Canola	cytosol	53.7	53.8
KRG97698	Soybean	nucleus	54.08	53.77
KRH31173	Soybean	nucleus	53.51	53.41
CDX98848	Canola	cytosol	52.94	53.04
KRH73273	Soybean	nucleus	52.18	51.69
KRH14921	Soybean	cytosol	50.85	50.09
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	48.77	49.9

Protein Annotations

EnsemblPlants:Zm00001d010590_P001	EnsemblPlants:Zm00001d010590_T001	EnsemblPlantsGene:Zm00001d010590	EntrezGene:100274105	Gene3D:2.40.160.50	Gene3D:3.10.20.310
GO:GO:0005575	GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	PANTHER:PTHR12815
PANTHER:PTHR12815:SF15	PFAM:PF01103	PFAM:PF07244	ProteinID:AQK94422.1	SEG:seg	UniParc:UPI000222082E
UniProt:K7VWF2	MapMan:23.2.2.1	:	:	:	:

Description

Outer membrane OMP85 family protein

Coordinates

chr8:-:121144352..121148411

Molecular Weight (calculated)

57246.3 Da

IEP (calculated)

5.394

GRAVY (calculated)

-0.267

Length

527 amino acids

Sequence
(BLAST)

001: MAAAADSASD QNPKDAERHV LTAESDADFS EEDYDEDGEE EYEEEEELDG PAAAAAERER MQSVLRRLSS DPVGIRVHDV IIKGNTKTQD ELIEAEVAEL
101: LRAAPTVQDL LRAASVATAR LHDLDIFDAV KITLDAGPPE LPGTTNVVIE VVEVANPLTG TAGVYSKPEA RSWSLEGSLK LKNLFGYGDI WDASGSFGWD
201: QTTEVGVGVC LPRFKSIPTP LMARASLSSQ DWLKFSSYKE RLLGLSFGLL STRNHDLSYN LAWRTLTDPS RVSSKAIRRQ LGHNLLSALK YTYKIDKRDS
301: HLRPTKGYAF QSTSQVGGLW NSKGLRYFRQ EFDVRGAVPL GFYSAALNVG VGAGVILPLA GGFMNSTSSV PERFYLGGNS SPVCSLGGPS SLLGFRLRGV
401: GPTEARRHVL NNSESGSADP GRDYLGGDLA VSAFADLSFD LPLKIFRDAG IHGHAFLTAG NLAKLSEGEY KNFSASEFRQ TFRSSAGVGI ILPTKLFRVE
501: VNYCRILKQA EHDSAKTGIQ FSFSSPM

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.