Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G296200.1 | Wheat | cytosol | 96.94 | 97.69 |
| TraesCS1B01G305000.1 | Wheat | cytosol | 94.84 | 96.88 |
| TraesCS2D01G101900.1 | Wheat | cytosol | 93.31 | 93.85 |
| HORVU1Hr1G070610.1 | Barley | cytosol, mitochondrion, nucleus | 94.84 | 84.79 |
| Os05t0470800-01 | Rice | mitochondrion | 79.16 | 79.62 |
| Zm00001d010590_P001 | Maize | plasma membrane | 77.82 | 77.23 |
| EES19675 | Sorghum | cytosol | 77.82 | 76.79 |
| TraesCS3D01G343400.1 | Wheat | cytosol | 64.44 | 64.31 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 61.57 | 60.07 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 59.66 | 59.54 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 59.27 | 59.16 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 60.61 | 57.22 |
| CDY00993 | Canola | cytosol | 53.15 | 56.16 |
| CDY00721 | Canola | nucleus | 52.77 | 54.76 |
| KRG97698 | Soybean | nucleus | 54.88 | 54.15 |
| KRH31173 | Soybean | nucleus | 54.49 | 53.98 |
| CDX73892 | Canola | nucleus | 52.58 | 53.92 |
| Bra034868.1-P | Field mustard | cytosol | 51.63 | 53.78 |
| CDY08552 | Canola | cytosol | 51.63 | 53.78 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 54.88 | 53.75 |
| Bra001389.1-P | Field mustard | nucleus | 52.39 | 53.73 |
| KRH73273 | Soybean | nucleus | 53.92 | 53.01 |
| AT5G05520.1 | Thale cress | cytosol | 52.58 | 52.48 |
| AT3G11070.1 | Thale cress | nucleus | 51.82 | 52.12 |
| KRH14921 | Soybean | cytosol | 52.01 | 50.84 |
| TraesCS5D01G158200.2 | Wheat | cytosol | 49.52 | 50.29 |
| Bra009118.1-P | Field mustard | nucleus | 50.48 | 50.09 |
| CDX70145 | Canola | cytosol | 50.1 | 49.81 |
| CDX98848 | Canola | cytosol | 49.14 | 48.86 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G295900.1 | EnsemblPlantsGene:TraesCS1D01G295900 | Gene3D:2.40.160.50 | Gene3D:3.10.20.310 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0019867 | InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | PFAM:PF01103 | SEG:seg |
| MapMan:23.2.2.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:394269088..394272734
Molecular Weight (calculated)
56599.8 Da
IEP (calculated)
5.707
GRAVY (calculated)
-0.206
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MANAADPAAD QNPKDAGSRV PEPWAGADGE VAEEEDEYED EEELDEPAAA ALVREKVQSV FRRLSTDPVG IRVHDVIIRG NAKTRDELIE AEVADLLRSA
101: TTVQDLLSAA ADASARLRGL DVFEAVNITL DAGPPELPGT TNVVIEVVEP AIPLSGNAGV YSKPEAKAWS VEGAVKWKNL AGYADIWDAS VAYGFDQTTE
201: VGVGVSLPRF KSIPTPLMAR ASLLSQDWMK FSSYKERLLG LSLGLLSTRH HDLSYNLTWR SLTDPSRLAS TSIRRQLGHN LLSALKYTYK IDQRDSHIRP
301: TKGYAFLSSS QVGGLWDNKG LKFFRQEFDV RAAVPFGFWN AALNVGAGAG VILPLARGFM NSSTPVTDRF NLGGHNSPVC SLGGISSLLG FRTRGVGPTE
401: PRRLVPGESE DGSPAVPGRD YLGGDLAVSA FADLSFDLPL KVLRDAGIHG HAFLTAGNLA KLSEGQYKNF SLDEFRRSFR STAGVGIILP TKLFRVEVNY
501: CYILKQSQHD SGKTGIQFSF SSP
101: TTVQDLLSAA ADASARLRGL DVFEAVNITL DAGPPELPGT TNVVIEVVEP AIPLSGNAGV YSKPEAKAWS VEGAVKWKNL AGYADIWDAS VAYGFDQTTE
201: VGVGVSLPRF KSIPTPLMAR ASLLSQDWMK FSSYKERLLG LSLGLLSTRH HDLSYNLTWR SLTDPSRLAS TSIRRQLGHN LLSALKYTYK IDQRDSHIRP
301: TKGYAFLSSS QVGGLWDNKG LKFFRQEFDV RAAVPFGFWN AALNVGAGAG VILPLARGFM NSSTPVTDRF NLGGHNSPVC SLGGISSLLG FRTRGVGPTE
401: PRRLVPGESE DGSPAVPGRD YLGGDLAVSA FADLSFDLPL KVLRDAGIHG HAFLTAGNLA KLSEGQYKNF SLDEFRRSFR STAGVGIILP TKLFRVEVNY
501: CYILKQSQHD SGKTGIQFSF SSP
001: MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS
Arabidopsis Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRL6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.