CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31173	Soybean	nucleus	94.53	94.89
KRH73273	Soybean	nucleus	77.92	77.63
KRH14921	Soybean	cytosol	75.66	74.95
PGSC0003DMT400020747	Potato	mitochondrion	59.43	60.11
VIT_13s0067g01510.t01	Wine grape	cytosol	60.57	60.11
TraesCS2A01G102400.1	Wheat	mitochondrion	31.7	60.0
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	58.49	59.16
CDY00721	Canola	nucleus	55.28	58.13
Bra001389.1-P	Field mustard	nucleus	55.85	58.04
CDX73892	Canola	nucleus	55.47	57.65
CDY00993	Canola	cytosol	53.58	57.37
Os05t0470800-01	Rice	mitochondrion	56.04	57.12
TraesCS1B01G305000.1	Wheat	cytosol	54.53	56.45
AT3G11070.1	Thale cress	nucleus	55.28	56.35
TraesCS2B01G119500.1	Wheat	mitochondrion	52.45	55.94
CDY08552	Canola	cytosol	52.83	55.78
Bra034868.1-P	Field mustard	cytosol	52.83	55.78
TraesCS2D01G101900.1	Wheat	cytosol	54.72	55.77
AT5G05520.1	Thale cress	cytosol	54.91	55.53
TraesCS1A01G296200.1	Wheat	cytosol	54.34	55.49
TraesCS1D01G295900.1	Wheat	cytosol	54.15	54.88
EES19675	Sorghum	cytosol	54.53	54.53
GSMUA_Achr5P14260_001	Banana	cytosol	54.91	54.29
Zm00001d010590_P001	Maize	plasma membrane	53.77	54.08
CDX98848	Canola	cytosol	52.45	52.85
GSMUA_Achr4P18790_001	Banana	cytosol	54.91	52.53
CDX70145	Canola	cytosol	52.08	52.47
Bra009118.1-P	Field mustard	nucleus	52.08	52.37
TraesCS3D01G343400.1	Wheat	cytosol	50.75	51.34
EES01699	Sorghum	cytosol	51.32	50.84
TraesCS3B01G382000.1	Wheat	cytosol	50.38	50.66
TraesCS3A01G349400.1	Wheat	cytosol	50.19	50.57
Zm00001d012467_P001	Maize	plasma membrane	50.57	50.38
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	54.72	49.57
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	29.25	48.74
EES09088	Sorghum	cytosol	45.09	46.5
EES16490	Sorghum	cytosol	45.28	46.42
HORVU3Hr1G087800.9	Barley	cytosol	50.38	46.35
TraesCS5D01G158200.2	Wheat	cytosol	44.34	45.63
TraesCS4B01G365800.1	Wheat	plastid	24.53	45.45
TraesCS5A01G152900.1	Wheat	cytosol	44.15	45.44
TraesCS5B01G151700.1	Wheat	cytosol	43.96	45.24
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	43.4	44.66

Protein Annotations

EMBL:ACUP02010809	EnsemblPlants:KRG97698	EnsemblPlantsGene:GLYMA_18G025400	EntrezGene:100785408	Gene3D:2.40.160.50	Gene3D:3.10.20.310
GO:GO:0005575	GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	ncoils:Coil
PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	PFAM:PF07244	ProteinID:KRG97698	ProteinID:KRG97698.1
SEG:seg	UniParc:UPI000233F405	UniProt:A0A0R0F381	MapMan:23.2.2.1	:	:

Description

hypothetical protein

Coordinates

chr18:+:1871732..1876652

Molecular Weight (calculated)

59579.8 Da

IEP (calculated)

5.057

GRAVY (calculated)

-0.467

Length

530 amino acids

Sequence
(BLAST)

001: MENSDEQLPF SPQNPNNAEE EDDDIEEPED EDEEEEEEDD DDDDVVSQEQ SPLSRLREQR SKLETLSRRL ASELVPIRVH DVLIRGNTKT KEWVIEAELK
101: LLEEATNVQE LIRASEIALA RLRGLEIFDT AELTLQAGPP ELPHTANVVV DVVESANRIS GDFGVYTKPA TSSWSAEGGL KYKNLLGYGD LWDASLAYGA
201: NQTTEVSVGV YAPRLKGLLT PFVARLSMLS QDWQEFSSYK EQLLGLSLGL ISTRHHDLVY TLGWRTLTDP SQMSSRSIRR QLGHGLLSSL KYTFKIDRRN
301: SPIRPTNGYA FLSTTHFGGL TPDHRSLRFL RQEFDVRCAI PFGFYNTALN LGISAGAVFP WGHGFMNKPS PLPERFYLGG DFSPVCTLGG PITLWGFKTR
401: GLGPTEPRRR SRDGIIDDSD DSSRWDFIGG DLAVTAFADL SFDLPIRWLR DHGIHGHVFA GAGNTAKLTQ NEYKHFSPRK FLESFRTSVG CGFVVPTRLF
501: RLEGNFYYIL KQNEHDRGKT GFRFSFSAPS

Best Arabidopsis Sequence Match ( AT3G11070.1 )
(BLAST)

001: MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRL6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.