Factsheet for GSMUA_Achr4P18790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P14260_001	Banana	cytosol	76.35	78.92
Zm00001d010590_P001	Maize	plasma membrane	61.55	64.71
EES19675	Sorghum	cytosol	61.37	64.15
Os05t0470800-01	Rice	mitochondrion	59.03	62.88
TraesCS2A01G102400.1	Wheat	mitochondrion	31.59	62.5
TraesCS1B01G305000.1	Wheat	cytosol	56.5	61.13
VIT_13s0067g01510.t01	Wine grape	cytosol	58.84	61.05
TraesCS2D01G101900.1	Wheat	cytosol	57.22	60.96
PGSC0003DMT400020747	Potato	mitochondrion	57.58	60.88
TraesCS2B01G119500.1	Wheat	mitochondrion	54.51	60.76
TraesCS1D01G295900.1	Wheat	cytosol	57.22	60.61
TraesCS1A01G296200.1	Wheat	cytosol	56.68	60.5
EES01699	Sorghum	cytosol	57.76	59.81
Zm00001d012467_P001	Maize	plasma membrane	56.68	59.02
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	55.42	58.59
CDY00721	Canola	nucleus	52.17	57.34
CDY00993	Canola	cytosol	51.08	57.17
Bra001389.1-P	Field mustard	nucleus	51.44	55.88
TraesCS3B01G382000.1	Wheat	cytosol	53.07	55.79
TraesCS3D01G343400.1	Wheat	cytosol	52.71	55.73
CDX73892	Canola	nucleus	51.08	55.49
TraesCS3A01G349400.1	Wheat	cytosol	52.35	55.13
KRG97698	Soybean	nucleus	52.53	54.91
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	57.94	54.87
Bra034868.1-P	Field mustard	cytosol	49.46	54.58
CDY08552	Canola	cytosol	49.46	54.58
AT5G05520.1	Thale cress	cytosol	51.26	54.2
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	30.87	53.77
AT3G11070.1	Thale cress	nucleus	50.18	53.46
KRH31173	Soybean	nucleus	50.9	53.41
KRH73273	Soybean	nucleus	50.72	52.82
KRH14921	Soybean	cytosol	49.82	51.59
HORVU3Hr1G087800.9	Barley	cytosol	53.61	51.56
EES09088	Sorghum	cytosol	47.83	51.56
CDX98848	Canola	cytosol	48.38	50.95
TraesCS5A01G152900.1	Wheat	cytosol	47.29	50.87
EES16490	Sorghum	cytosol	47.47	50.87
TraesCS5D01G158200.2	Wheat	cytosol	47.11	50.68
Bra009118.1-P	Field mustard	nucleus	48.19	50.66
TraesCS5B01G151700.1	Wheat	cytosol	46.75	50.29
CDX70145	Canola	cytosol	47.65	50.19
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	46.21	49.71
TraesCS4B01G365800.1	Wheat	plastid	25.27	48.95

Protein Annotations

EnsemblPlants:GSMUA_Achr4P18790_001	EnsemblPlants:GSMUA_Achr4T18790_001	EnsemblPlantsGene:GSMUA_Achr4G18790_001	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:IPR034746	InterPro:POTRA	PANTHER:PTHR12815
PANTHER:PTHR12815:SF15	PFAM:PF01103	PFscan:PS51779	SEG:seg	UniParc:UPI000295C6F8	UniProt:M0SQ42
MapMan:23.2.2.1	:	:	:	:	:

Description

Putative Sorting and assembly machinery component 50 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr4G18790_001]

Coordinates

chr4:+:19804390..19815336

Molecular Weight (calculated)

60898.6 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.381

Length

554 amino acids

Sequence
(BLAST)

001: MAIPSDSEGG TNPKPGGVKD KGDGKAVPED TTNGLGREGE EDEDEDEDEI EEDEEEDGDE EAEENVTPSS ERKNLDRLLR RLSGGPVRLR VHDVIIRGNT
101: KTKDALIESE VLDAFRTASS MQELLQAAGL ANTRLRQLDI FYSVNITLDS GPSELPGTAN VVIDIVEAKN PLTGDFGVYS KPEARSWSLE GSLKLKNLFG
201: YGDILDASGA YGFDQTSEIS AGVSLPRFKA ISTPLMARVS LLSHDWLKFS SYKERLLGLS FGLISTRNHD LTYNLTWRNL SDPSRVSSKS IRRQLGHSLL
301: SSVKYTFRVD HRDSHLRPTR GFAFLSTSQV GGLGPDSRIL RFIRQEFDLR GAFPLGFYHA AVNFGVAAGA ILPWGSGFMN STTPLSERFY MGGQSSPVCN
401: LGGPTSLLGF KLRGLGPSDL RRVIPPKRGE DEATTSSERD ASGSITSPGR DVTGGDFAVT AFADLSFDLP LKVFRESGVH GHVFINAGNL VKLTDDEFKN
501: FSVKRFLEMF RSSAGFGIIF PTRFFRMEIN YCYILKQFQH DHGKTGIQFS FSTP

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.