CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97698	Soybean	nucleus	94.89	94.53
KRH73273	Soybean	nucleus	78.41	77.82
KRH14921	Soybean	cytosol	76.52	75.51
VIT_13s0067g01510.t01	Wine grape	cytosol	60.42	59.74
PGSC0003DMT400020747	Potato	mitochondrion	59.09	59.54
TraesCS2A01G102400.1	Wheat	mitochondrion	30.87	58.21
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	57.58	58.02
CDY00721	Canola	nucleus	55.3	57.94
Bra001389.1-P	Field mustard	nucleus	55.87	57.84
CDX73892	Canola	nucleus	55.49	57.45
Os05t0470800-01	Rice	mitochondrion	55.87	56.73
CDY00993	Canola	cytosol	53.03	56.57
TraesCS1B01G305000.1	Wheat	cytosol	54.36	56.05
AT3G11070.1	Thale cress	nucleus	54.73	55.58
TraesCS2B01G119500.1	Wheat	mitochondrion	51.89	55.13
CDY08552	Canola	cytosol	52.27	54.98
Bra034868.1-P	Field mustard	cytosol	52.27	54.98
TraesCS1A01G296200.1	Wheat	cytosol	53.98	54.91
AT5G05520.1	Thale cress	cytosol	54.36	54.77
TraesCS2D01G101900.1	Wheat	cytosol	53.79	54.62
TraesCS1D01G295900.1	Wheat	cytosol	53.98	54.49
EES19675	Sorghum	cytosol	54.36	54.15
GSMUA_Achr5P14260_001	Banana	cytosol	54.73	53.92
Zm00001d010590_P001	Maize	plasma membrane	53.41	53.51
CDX98848	Canola	cytosol	51.52	51.71
Bra009118.1-P	Field mustard	nucleus	51.52	51.61
CDX70145	Canola	cytosol	51.33	51.52
TraesCS3B01G382000.1	Wheat	cytosol	51.14	51.23
TraesCS3A01G349400.1	Wheat	cytosol	50.95	51.14
Zm00001d012467_P001	Maize	plasma membrane	51.33	50.94
GSMUA_Achr4P18790_001	Banana	cytosol	53.41	50.9
TraesCS3D01G343400.1	Wheat	cytosol	50.38	50.76
EES01699	Sorghum	cytosol	51.14	50.47
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	54.17	48.89
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	28.6	47.48
HORVU3Hr1G087800.9	Barley	cytosol	50.38	46.18
EES09088	Sorghum	cytosol	44.51	45.72
TraesCS5A01G152900.1	Wheat	cytosol	44.51	45.63
TraesCS5D01G158200.2	Wheat	cytosol	44.51	45.63
EES16490	Sorghum	cytosol	44.51	45.45
TraesCS5B01G151700.1	Wheat	cytosol	44.32	45.44
TraesCS4B01G365800.1	Wheat	plastid	23.67	43.71
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	42.23	43.3

Protein Annotations

EMBL:ACUP02007125	EnsemblPlants:KRH31173	EnsemblPlantsGene:GLYMA_11G231800	EntrezGene:100804873	Gene3D:2.40.160.50	Gene3D:3.10.20.310
GO:GO:0005575	GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	ncoils:Coil	PANTHER:PTHR12815
PANTHER:PTHR12815:SF15	PFAM:PF01103	ProteinID:KRH31173	ProteinID:KRH31173.1	SEG:seg	UniParc:UPI000233D409
UniProt:K7LRS0	MapMan:23.2.2.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:32748620..32753268

Molecular Weight (calculated)

59123.5 Da

IEP (calculated)

5.193

GRAVY (calculated)

-0.423

Length

528 amino acids

Sequence
(BLAST)

001: MENSDEQLPF SPPNPNNAEE DDEIDEPEDE DEEEEEDDDD DDVVSQEQSP LSRLREQRSK LETLSRRLAS ELVPIRVHDV LIRGNTKTKA WLIEAELKLL
101: EEATTVQELI RASEIALARL RGLEIFDTAE LTLQAGPPEL PHTANVIVDV VETANKISGD FGVYTKPATS SWSAEGGLKY KNLLGYGDLW DASLAYGANQ
201: TTEVSVGVYA PRLKGLLTPL VARLSMLSQD WQEFSSYKEQ LLGLSLGLIS ARHHDLVYTL GWHTLTDPSQ MSSRSIRRQL GHGLVSSLKY TFKIDRRNSP
301: IRPTKGYAFL STTHFGGLTP DPRSLRFLRQ EFDVRCVIPF GFYNTALNLG ISAGAVFPWG HGFMNKPSPL PERFYLGGDF SPVCTLGGPI TLWGFKTRGL
401: GPTEPQRRSR DGIIDDNDDS SRWDFIGGDL AVTAFADLSF DLPVRWLRDH GIHGHVFAGA GNTAKLTQNE YKHFSPRKFL ESFRTSVGCG FVVPTRLFRL
501: EGNFYYILKQ NEHDRGKTGF RFSFSAPS

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.