Factsheet for Bra009118.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70145	Canola	cytosol	96.96	97.15
AT5G05520.1	Thale cress	cytosol	78.75	79.2
Bra001389.1-P	Field mustard	nucleus	67.55	69.8
Bra034868.1-P	Field mustard	cytosol	65.09	68.33
PGSC0003DMT400020747	Potato	mitochondrion	58.06	58.4
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	56.36	56.68
Zm00001d010590_P001	Maize	plasma membrane	54.46	54.46
EES19675	Sorghum	cytosol	53.89	53.58
Os05t0470800-01	Rice	mitochondrion	52.18	52.88
VIT_13s0067g01510.t01	Wine grape	cytosol	53.51	52.81
KRG97698	Soybean	nucleus	52.37	52.08
KRH73273	Soybean	nucleus	52.18	51.69
KRH31173	Soybean	nucleus	51.61	51.52
TraesCS1B01G305000.1	Wheat	cytosol	49.72	51.17
TraesCS2A01G102400.1	Wheat	mitochondrion	26.95	50.71
GSMUA_Achr5P14260_001	Banana	cytosol	51.42	50.56
TraesCS1A01G296200.1	Wheat	cytosol	49.72	50.48
TraesCS1D01G295900.1	Wheat	cytosol	50.09	50.48
EES01699	Sorghum	cytosol	50.28	49.53
Zm00001d012467_P001	Maize	plasma membrane	49.91	49.44
TraesCS2D01G101900.1	Wheat	cytosol	48.77	49.42
KRH14921	Soybean	cytosol	50.09	49.35
TraesCS3B01G382000.1	Wheat	cytosol	49.34	49.34
TraesCS3A01G349400.1	Wheat	cytosol	48.77	48.86
TraesCS3D01G343400.1	Wheat	cytosol	48.39	48.66
TraesCS2B01G119500.1	Wheat	mitochondrion	45.54	48.29
GSMUA_Achr4P18790_001	Banana	cytosol	50.66	48.19
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	29.03	48.11
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	50.66	45.64
TraesCS4B01G365800.1	Wheat	plastid	24.67	45.45
HORVU3Hr1G087800.9	Barley	cytosol	49.34	45.14
TraesCS5A01G152900.1	Wheat	cytosol	41.37	42.33
TraesCS5D01G158200.2	Wheat	cytosol	41.37	42.33
EES09088	Sorghum	cytosol	40.99	42.02
EES16490	Sorghum	cytosol	41.18	41.97
TraesCS5B01G151700.1	Wheat	cytosol	40.99	41.94
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	40.23	41.16

Protein Annotations

Gene3D:2.40.160.50	MapMan:23.2.2.1	Gene3D:3.10.20.310	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	EnsemblPlantsGene:Bra009118
EnsemblPlants:Bra009118.1	EnsemblPlants:Bra009118.1-P	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0009536	GO:GO:0016020	GO:GO:0019867	UniProt:M4CY21
PFAM:PF01103	PFAM:PF07244	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	UniParc:UPI0002544C46	SEG:seg

Description

AT5G05520 (E=2e-233) | outer membrane OMP85 family protein

Coordinates

chrA10:+:15306049..15309014

Molecular Weight (calculated)

58416.5 Da

IEP (calculated)

5.742

GRAVY (calculated)

-0.434

Length

527 amino acids

Sequence
(BLAST)

001: MANPADKPDP NLTTRDEGEV REEELEDIEE EEDDYEGEDD NDEATASKPQ TREDAAASRA NAQNLFRRMG VAPVPVRVHD VIVKGNEKTK DHVIEAEVEG
101: VRQATTLQEL LEAANVANFN LRALDIFDSV KITLDAGPPE LPDTTNVVVK VVESQSPLAA EIVTSTKSQA RSSTLEGSLK YKNIFGHGDI WDSSLAYGCD
201: NSGEVGLGLY LPRLRGRPTP FTSRLYLSTQ DWLKFSSYRE RALGVSLGVL LSKNHELGYT LAWRNLIDPT QMASRTIRRQ IGHSLVSDLK YTFKVDERNS
301: SLRPTRGYSF VSTSQIGGLV PDSRTLRFLR QEIDLKYAVP LGFYRSALNF GVSGGITFPW GSGYKSRGSS VSERFFLGGN ISPVCSLGGP SALWGFKTRG
401: LGPNEPRREV EDDKSGDTYE RDFVGGDVAV TAFADLSFDF PLRWFRERGI HGHVFACAGN IAELSGNKYR NFTAPKFLET FRSTVGAGIV LPTSLFRMEL
501: NYCHIVKKQE HDRAKSGFFM TFSTPSS

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.