Factsheet for TraesCS4B01G365800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G151700.1	Wheat	cytosol	72.73	40.39
TraesCS2B01G119500.1	Wheat	mitochondrion	48.95	28.17
TraesCS1B01G305000.1	Wheat	cytosol	49.3	27.54
CDY00993	Canola	cytosol	46.5	26.87
CDX73892	Canola	nucleus	46.85	26.27
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	47.9	26.14
GSMUA_Achr5P14260_001	Banana	cytosol	48.95	26.12
Bra001389.1-P	Field mustard	nucleus	46.5	26.08
CDY00721	Canola	nucleus	45.8	25.99
AT5G05520.1	Thale cress	cytosol	47.55	25.95
PGSC0003DMT400020747	Potato	mitochondrion	47.55	25.95
TraesCS3B01G382000.1	Wheat	cytosol	47.55	25.81
VIT_13s0067g01510.t01	Wine grape	cytosol	47.2	25.28
GSMUA_Achr4P18790_001	Banana	cytosol	48.95	25.27
CDY08552	Canola	cytosol	43.71	24.9
Bra034868.1-P	Field mustard	cytosol	43.71	24.9
CDX70145	Canola	cytosol	45.45	24.71
Bra009118.1-P	Field mustard	nucleus	45.45	24.67
KRH73273	Soybean	nucleus	45.8	24.62
KRG97698	Soybean	nucleus	45.45	24.53
CDX98848	Canola	cytosol	45.1	24.52
AT3G11070.1	Thale cress	nucleus	44.41	24.42
KRH31173	Soybean	nucleus	43.71	23.67
KRH14921	Soybean	cytosol	44.06	23.55

Protein Annotations

EnsemblPlants:TraesCS4B01G365800.1	EnsemblPlantsGene:TraesCS4B01G365800	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020	GO:GO:0019867
InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	MapMan:23.2.2.1	:

Description

No Description!

Coordinates

chr4B:+:653520945..653522683

Molecular Weight (calculated)

31375.7 Da

IEP (calculated)

9.586

GRAVY (calculated)

-0.153

Length

286 amino acids

Sequence
(BLAST)

001: MGVSVGLLST MNHNISYNLA WRTLADPARI SSNSIREQLG HSLLSSIKYA YKVDQRDSSI RPTRGYAFLS SSQVRGLAPE SKYSRFVRQE FDLRVALPLG
101: VLNGALNAGV AEGVIHPLEW GPAGSVSPLA ERFYLGGNRS LVCRLGGPSS LSGFKARGLE PRDLRSCGLT DSENGASTSP ELDGLGEVLC YNCILFRTEV
201: VPLKPLRDLG IHGHAFASTG NLAKLTERDL RKFPLTDLLQ TFRSFVGFGV VVPTRLFRIE MNYCHIPKQF DHDKGKTGIQ FNFSSP

Best Arabidopsis Sequence Match ( AT3G11070.1 )
(BLAST)

001: MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD
101: AVREATTLQE LLEASRVANS NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL KYKNIFGYGD IWDGSIVYGC
201: DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN
301: SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR
401: GVGPSEPKRK GDSERDFVGG DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG AGIVLPTSLF RMELNYCHIL
501: KKQEHDQARS GVFLTFSASS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SRL6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.