Factsheet for TraesCS2B01G119500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G102400.1	Wheat	mitochondrion	51.91	92.14
TraesCS2D01G101900.1	Wheat	cytosol	90.34	86.35
TraesCS1B01G305000.1	Wheat	cytosol	88.13	85.55
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	87.12	74.02
Os05t0470800-01	Rice	mitochondrion	75.86	72.5
Zm00001d010590_P001	Maize	plasma membrane	74.65	70.4
EES19675	Sorghum	cytosol	74.04	69.43
TraesCS3B01G382000.1	Wheat	cytosol	64.79	61.1
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	60.56	57.44
PGSC0003DMT400020747	Potato	mitochondrion	60.16	57.06
GSMUA_Achr5P14260_001	Banana	cytosol	59.15	54.85
GSMUA_Achr4P18790_001	Banana	cytosol	60.76	54.51
KRG97698	Soybean	nucleus	55.94	52.45
CDY00993	Canola	cytosol	51.71	51.92
KRH31173	Soybean	nucleus	55.13	51.89
VIT_13s0067g01510.t01	Wine grape	cytosol	55.33	51.5
CDY00721	Canola	nucleus	51.51	50.79
Bra034868.1-P	Field mustard	cytosol	50.7	50.2
CDY08552	Canola	cytosol	50.7	50.2
CDX73892	Canola	nucleus	51.11	49.8
Bra001389.1-P	Field mustard	nucleus	51.11	49.8
KRH73273	Soybean	nucleus	53.12	49.62
AT5G05520.1	Thale cress	cytosol	51.71	49.05
TraesCS4B01G365800.1	Wheat	plastid	28.17	48.95
AT3G11070.1	Thale cress	nucleus	50.1	47.88
KRH14921	Soybean	cytosol	51.11	47.48
TraesCS5B01G151700.1	Wheat	cytosol	48.89	47.18
Bra009118.1-P	Field mustard	nucleus	48.29	45.54
CDX98848	Canola	cytosol	48.09	45.44
CDX70145	Canola	cytosol	47.69	45.06

Protein Annotations

EnsemblPlants:TraesCS2B01G119500.1	EnsemblPlantsGene:TraesCS2B01G119500	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575	GO:GO:0016020
GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	SEG:seg
MapMan:23.2.2.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:86687927..86690262

Molecular Weight (calculated)

54140.7 Da

IEP (calculated)

10.185

GRAVY (calculated)

-0.137

Length

497 amino acids

Sequence
(BLAST)

001: MAKSLRRSTS TRRRRSWTSG RLRPLSGRRC SPCSGGSPRT WWLIRVHDVI IRGNAKMREE LIEAEVADLL RSATTVQDLL SAAADASARL CGLDVFEAVN
101: ITLDAGPPEL PGTANVVIEV IEPAIPISGN AGVFSKPEAK AWSLEGAVKW KNLAGYADIW DASVAYGWDQ TTEVGIGVSL PRFKSIPTPL MARASLLSQD
201: WMKFSSYKER LLGLSFGLLS TRHHDLSYNL TWRTLTDPSR LASTSIRRQL GHNLLSALKY TYKIDRRDSH IRPTKGYAFL SSSQVGGLWD NKGLNFFRQE
301: FDVRAAVPFG LWNAALNVGV GAGVVLPLAK GFMNSSTPVT DRFNLGGHSS PVCSLGGISS LLGFRTRGVG PTEARRLVPG ESEDGSAAVP GRDYLGGDLA
401: VSAFADLSFD LPLKVFRDAG IHGHAFLTAG NLVKLSEGQY KNLSLDEFRR SFRSSAGVGI ILPTKLFRVE VNYCYILKQS QHDSGKTGIQ FSFSSPS

Best Arabidopsis Sequence Match ( AT3G15860.1 )
(BLAST)

001: MDLNNNKSNN IVKTLARWCL LLQAFMISSN TVALKEPDYV NMNITIRNSM TGLIRPEIVY RCQSKRKDYG WHRSPKPGVQ FSFPIILIKG ETKIPAIHIC
101: QIRSVLGTAT LVIQNTYLDA EMCPRSSCAH EATPKGIVFR GLEWDFKTVF PKLKPVEYLE LPWTPWPNRT

Arabidopsis Description

Plant self-incompatibility protein S1 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XVB9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.