Factsheet for HORVU1Hr1G070610.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G295900.1	Wheat	cytosol	84.79	94.84
TraesCS1A01G296200.1	Wheat	cytosol	83.59	94.22
TraesCS1B01G305000.1	Wheat	cytosol	82.39	94.14
TraesCS2D01G101900.1	Wheat	cytosol	83.42	93.85
TraesCS2A01G102400.1	Wheat	mitochondrion	42.91	89.64
TraesCS2B01G119500.1	Wheat	mitochondrion	74.02	87.12
Os05t0470800-01	Rice	mitochondrion	71.45	80.38
EES19675	Sorghum	cytosol	71.11	78.49
Zm00001d010590_P001	Maize	plasma membrane	70.6	78.37
GSMUA_Achr5P14260_001	Banana	cytosol	55.73	60.82
HORVU3Hr1G087800.9	Barley	cytosol	58.97	59.9
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	53.16	59.35
PGSC0003DMT400020747	Potato	mitochondrion	53.16	59.35
GSMUA_Achr4P18790_001	Banana	cytosol	54.87	57.94
CDY00993	Canola	cytosol	47.01	55.56
VIT_13s0067g01510.t01	Wine grape	cytosol	50.09	54.87
KRG97698	Soybean	nucleus	49.57	54.72
CDY00721	Canola	nucleus	47.01	54.56
KRH31173	Soybean	nucleus	48.89	54.17
CDX73892	Canola	nucleus	47.01	53.92
CDY08552	Canola	cytosol	46.15	53.78
Bra034868.1-P	Field mustard	cytosol	46.15	53.78
Bra001389.1-P	Field mustard	nucleus	46.84	53.73
AT5G05520.1	Thale cress	cytosol	47.35	52.86
KRH73273	Soybean	nucleus	48.03	52.82
AT3G11070.1	Thale cress	nucleus	45.81	51.54
KRH14921	Soybean	cytosol	46.5	50.84
Bra009118.1-P	Field mustard	nucleus	45.64	50.66
CDX70145	Canola	cytosol	45.3	50.38
CDX98848	Canola	cytosol	44.62	49.62

Protein Annotations

EnsemblPlants:HORVU1Hr1G070610.1	EnsemblPlantsGene:HORVU1Hr1G070610	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575	GO:GO:0016020
GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	SEG:seg
UniParc:UPI000B47B163	UniProt:A0A287G4K3	MapMan:23.2.2.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:490451736..490456015

Molecular Weight (calculated)

64015.0 Da

IEP (calculated)

8.562

GRAVY (calculated)

-0.277

Length

585 amino acids

Sequence
(BLAST)

001: KGKHVLSKRR REFNIIYLGF RPRQPTGPAL TIQLGKHERP HLKKQVKARK ALLFPQTPTM ADAADPAAGQ NPKVAGNHVP EPWAGADGEV AEEEFEYEDE
101: EEEELDEPAA AALEREKVQS VFRRLSSDPV GIRVHDVIIR GNAKTREELI EAEVADLIRS ATTVQDLLSA AAEASARLRG LDVFEAVNIT LDAGPPELPG
201: TTNVVIEVVE PSIPISGNAG VYSKPEAKAW SLEGAVKWKN LAGYADIWDA SVAYGWDQTT EVGVGVSLPR FKSIPTPLMA RASLLSQDWL KFSSYKERLL
301: GLSFGLLSTR HHDLSYNLTW RTLTDPSRLA STSIRRQLGH NLLSALKYTY KIDERDSHIR PTKGYAFLST SQVGGLWDNK GLKFFRQEFD VRAAVPFGFW
401: NAALNVGVGA GVILPLSRGF MNSSTPVTDR FNLGGHSSPV CSLGGISSLL GFRTRGVGPT EPRRLVPGES EDGSPAVPGR DYLGGDLAVS AFADVSFDLP
501: LKLFRDAGIH GHAFLTAGNL AKLSEGQYKN FSLDEFRRSF RSTAGVGIIL PTKLFRVEVN YCYILKQSRH DSGKTGIQFS FSSPS

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.