Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G343400.1 | Wheat | cytosol | 81.25 | 89.31 |
| TraesCS3B01G382000.1 | Wheat | cytosol | 76.56 | 83.68 |
| TraesCS3A01G349400.1 | Wheat | cytosol | 76.22 | 83.46 |
| EES01699 | Sorghum | cytosol | 63.02 | 67.85 |
| Zm00001d012467_P001 | Maize | plasma membrane | 58.85 | 63.72 |
| HORVU1Hr1G070610.1 | Barley | cytosol, mitochondrion, nucleus | 59.9 | 58.97 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 52.26 | 56.16 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 50.17 | 55.15 |
| CDY00993 | Canola | cytosol | 47.4 | 55.15 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 49.31 | 54.2 |
| CDY00721 | Canola | nucleus | 47.4 | 54.17 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 51.56 | 53.61 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 49.65 | 53.56 |
| CDX73892 | Canola | nucleus | 47.4 | 53.53 |
| Bra001389.1-P | Field mustard | nucleus | 47.4 | 53.53 |
| AT5G05520.1 | Thale cress | cytosol | 48.44 | 53.24 |
| Bra034868.1-P | Field mustard | cytosol | 46.01 | 52.79 |
| CDY08552 | Canola | cytosol | 46.01 | 52.79 |
| AT3G11070.1 | Thale cress | nucleus | 47.22 | 52.31 |
| KRH31173 | Soybean | nucleus | 46.18 | 50.38 |
| KRG97698 | Soybean | nucleus | 46.35 | 50.38 |
| CDX98848 | Canola | cytosol | 45.49 | 49.81 |
| KRH73273 | Soybean | nucleus | 45.83 | 49.62 |
| Bra009118.1-P | Field mustard | nucleus | 45.14 | 49.34 |
| CDX70145 | Canola | cytosol | 44.97 | 49.24 |
| KRH14921 | Soybean | cytosol | 44.79 | 48.22 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G087800.9 | EnsemblPlantsGene:HORVU3Hr1G087800 | Gene3D:2.40.160.50 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0019867 |
| InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | PFAM:PF01103 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B4610A8 | UniProt:A0A287M4N7 | MapMan:23.2.2.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:622786576..622793173
Molecular Weight (calculated)
63866.7 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.213
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: KQTLHFHFSP EETPAMAIAA DSTAEQAPNP APHEPSYEPR KDPYQPDRGE DNEVDFDEEE EDDAEELDGS AARAAYKEKV DALFRRLSTE PVGIRVHNVT
101: VRGNFKTRGS LIEAEVADLL RSAGTVQGLL RASSHATALL RRLDVFDSVS ITLDAGPPEF PGTANVIIQV VEAARPYNRG IFFFPKKEAI SWPVEGWFML
201: KNLFGYGDMW DVSGEYGWDQ SSRIEIGVYL PRLKSIPTPL TARASILSED WLKFSSYKER RLGLKFGLLS TWRHNLSYDL AWRALTDPSQ MASESIRRQL
301: GHNLLSALSY AYKIDKRDSE FRPTKGYAFV STSQVGGLWK NGLRFFRQEF DVRGAVPFGF CNAALNVGIS AGVILPLSRG FMELSSPVPA RFYLGGLSSP
401: VCSLGGLSSL LGFKTRGVGP SEPRRSVPGK SVTVDAAAST GRDYLGGDLA ISAFADLSFD LPLKLLRDNG IHGHAFLCAG NLAKLSEGEF KNFSFPEFRR
501: TFRSSAGVGI VFPTSLFRME VYFETSIFHY ATLGVCWVTN PCYIGLSLFQ LNYCHILKKH EHDHGKSGIQ FSFSLE
101: VRGNFKTRGS LIEAEVADLL RSAGTVQGLL RASSHATALL RRLDVFDSVS ITLDAGPPEF PGTANVIIQV VEAARPYNRG IFFFPKKEAI SWPVEGWFML
201: KNLFGYGDMW DVSGEYGWDQ SSRIEIGVYL PRLKSIPTPL TARASILSED WLKFSSYKER RLGLKFGLLS TWRHNLSYDL AWRALTDPSQ MASESIRRQL
301: GHNLLSALSY AYKIDKRDSE FRPTKGYAFV STSQVGGLWK NGLRFFRQEF DVRGAVPFGF CNAALNVGIS AGVILPLSRG FMELSSPVPA RFYLGGLSSP
401: VCSLGGLSSL LGFKTRGVGP SEPRRSVPGK SVTVDAAAST GRDYLGGDLA ISAFADLSFD LPLKLLRDNG IHGHAFLCAG NLAKLSEGEF KNFSFPEFRR
501: TFRSSAGVGI VFPTSLFRME VYFETSIFHY ATLGVCWVTN PCYIGLSLFQ LNYCHILKKH EHDHGKSGIQ FSFSLE
001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
Arabidopsis Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.