Factsheet for GSMUA_Achr5P14260_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P18790_001	Banana	cytosol	78.92	76.35
EES19675	Sorghum	cytosol	64.93	65.66
Zm00001d010590_P001	Maize	plasma membrane	63.43	64.52
Os05t0470800-01	Rice	mitochondrion	62.5	64.42
TraesCS1D01G295900.1	Wheat	cytosol	60.07	61.57
TraesCS1B01G305000.1	Wheat	cytosol	58.77	61.52
TraesCS1A01G296200.1	Wheat	cytosol	59.33	61.27
TraesCS2A01G102400.1	Wheat	mitochondrion	31.9	61.07
EES01699	Sorghum	cytosol	60.82	60.93
TraesCS2D01G101900.1	Wheat	cytosol	58.96	60.77
Zm00001d012467_P001	Maize	plasma membrane	59.7	60.15
VIT_13s0067g01510.t01	Wine grape	cytosol	59.51	59.74
PGSC0003DMT400020747	Potato	mitochondrion	58.02	59.35
TraesCS2B01G119500.1	Wheat	mitochondrion	54.85	59.15
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	56.72	58.02
TraesCS3B01G382000.1	Wheat	cytosol	56.34	57.31
TraesCS3A01G349400.1	Wheat	cytosol	55.97	57.03
CDY00993	Canola	cytosol	52.43	56.77
TraesCS3D01G343400.1	Wheat	cytosol	55.41	56.68
CDY00721	Canola	nucleus	52.61	55.95
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	60.82	55.73
CDX73892	Canola	nucleus	52.99	55.69
Bra001389.1-P	Field mustard	nucleus	52.99	55.69
KRH73273	Soybean	nucleus	54.66	55.08
KRG97698	Soybean	nucleus	54.29	54.91
KRH31173	Soybean	nucleus	53.92	54.73
AT5G05520.1	Thale cress	cytosol	53.36	54.58
CDY08552	Canola	cytosol	50.93	54.38
Bra034868.1-P	Field mustard	cytosol	50.93	54.38
AT3G11070.1	Thale cress	nucleus	52.24	53.85
KRH14921	Soybean	cytosol	53.17	53.27
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	31.16	52.52
HORVU3Hr1G087800.9	Barley	cytosol	56.16	52.26
Bra009118.1-P	Field mustard	nucleus	50.56	51.42
CDX98848	Canola	cytosol	50.37	51.33
CDX70145	Canola	cytosol	50.37	51.33
TraesCS5D01G158200.2	Wheat	cytosol	48.32	50.29
TraesCS5A01G152900.1	Wheat	cytosol	48.13	50.1
EES09088	Sorghum	cytosol	47.95	50.0
TraesCS5B01G151700.1	Wheat	cytosol	47.76	49.71
TraesCS4B01G365800.1	Wheat	plastid	26.12	48.95
EES16490	Sorghum	cytosol	47.2	48.94
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	46.46	48.35

Protein Annotations

EnsemblPlants:GSMUA_Achr5P14260_001	EnsemblPlants:GSMUA_Achr5T14260_001	EnsemblPlantsGene:GSMUA_Achr5G14260_001	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575
GO:GO:0016020	GO:GO:0019867	InterPro:Bac_surfAg_D15	InterPro:BamA/TamA_POTRA	InterPro:IPR034746	InterPro:POTRA
PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	PFAM:PF07244	PFscan:PS51779	SEG:seg
UniParc:UPI000296345F	UniProt:M0SYF5	MapMan:23.2.2.1	:	:	:

Description

Putative Sorting and assembly machinery component 50 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr5G14260_001]

Coordinates

chr5:-:10244876..10249795

Molecular Weight (calculated)

58956.3 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.349

Length

536 amino acids

Sequence
(BLAST)

001: MATPSDSEAG PNPKPVEELE TESATNDEHQ GEDEDEIEEE EEEEGDDEEA EEDETPAAQR ENINRLFRRL SGGPVRLRVQ DIIIRGNTKT KDALIEAEVL
101: DAFRSACSMQ ELIQAAGLAN TRLRQLDIFD SVSITLDSGP SELPGTANVV IDVVEARNPL TGEFGAYSKP EARSWSLEGS LKLKNLFGYG DIWDASGAYG
201: FGQTSEISAG VSLPRFKAIS TPLMTRVSLL SQDWLKFSSY KERLLGLSVG LISTGNHDLA YNLTWRNLSD PSHMSSKTIR RQLGHSLLSS LKYTYRIDHR
301: DSNLRPTRGY AFLSTSQFGG LGPDSRILRF IRQEFDVRGA FPLGFYNAAV NFGVAAGAIM PWGRGFMDST SPLPERFYMG GHSSPICSLG GPTSLLGFKL
401: RGVGPTDERR AILTKHGEDE ATTPGRIASP GGDAIGGNLA VTAFADLSFD LPLKLFRESG VHGHMFLNTG NVVDLTPAEF KNFSFRGFLE TFRSSAGFGI
501: IFPTRFFRME INYCYILKQL QHDHGKTGIQ FSFSTP

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.