Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G349400.1 | Wheat | cytosol | 94.31 | 94.49 |
| TraesCS3D01G343400.1 | Wheat | cytosol | 85.96 | 86.45 |
| HORVU3Hr1G087800.9 | Barley | cytosol | 83.68 | 76.56 |
| Zm00001d012467_P001 | Maize | plasma membrane | 69.83 | 69.17 |
| TraesCS1B01G305000.1 | Wheat | cytosol | 64.52 | 66.41 |
| EES01699 | Sorghum | cytosol | 67.17 | 66.17 |
| TraesCS2B01G119500.1 | Wheat | mitochondrion | 61.1 | 64.79 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 57.31 | 56.34 |
| CDY00993 | Canola | cytosol | 51.42 | 54.75 |
| CDY00721 | Canola | nucleus | 52.18 | 54.56 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 53.89 | 54.2 |
| Bra001389.1-P | Field mustard | nucleus | 52.18 | 53.92 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 54.46 | 53.75 |
| CDX73892 | Canola | nucleus | 51.99 | 53.73 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 53.32 | 53.63 |
| AT3G11070.1 | Thale cress | nucleus | 52.37 | 53.08 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 55.79 | 53.07 |
| Bra034868.1-P | Field mustard | cytosol | 50.47 | 52.99 |
| CDY08552 | Canola | cytosol | 50.47 | 52.99 |
| AT5G05520.1 | Thale cress | cytosol | 52.18 | 52.48 |
| KRH31173 | Soybean | nucleus | 51.23 | 51.14 |
| KRG97698 | Soybean | nucleus | 50.66 | 50.38 |
| Bra009118.1-P | Field mustard | nucleus | 49.34 | 49.34 |
| CDX70145 | Canola | cytosol | 49.15 | 49.24 |
| TraesCS5B01G151700.1 | Wheat | cytosol | 48.01 | 49.13 |
| KRH73273 | Soybean | nucleus | 49.15 | 48.68 |
| CDX98848 | Canola | cytosol | 48.39 | 48.48 |
| KRH14921 | Soybean | cytosol | 48.39 | 47.66 |
| TraesCS4B01G365800.1 | Wheat | plastid | 25.81 | 47.55 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G382000.1 | EnsemblPlantsGene:TraesCS3B01G382000 | Gene3D:2.40.160.50 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0019867 |
| InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | PFAM:PF01103 | SEG:seg | MapMan:23.2.2.1 |
Description
No Description!
Coordinates
chr3B:+:602295799..602301614
Molecular Weight (calculated)
58173.0 Da
IEP (calculated)
7.004
GRAVY (calculated)
-0.235
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAADSTAE QAPNPAPHEP SDEPRKAPDQ PDRGEDNGVD FDEEEDDPEE LDRPAAYKEK VKAVFRRLHA EPVRIRVHDV IIRGNFKTRG SLIEAEVGDL
101: LRSAGTVQGL VRASSHANAL LRRLDVFDSV SITLDAGPPG FPGTANVTIQ VVEAARPYNR GIFFFPKKEV ISWPVEGWFM LKNLFGYGDM WDVSGEYGWD
201: QSSKIDIGVY LPRLKSIPTP LTARASILSE DWLKFSSYKE RLLGLKFGLL STWHHNLSYD LAWRTLTDPS QMASESIRRQ LGHNLLSALS YAYKIDKRDS
301: EFRPTKGYAF VSTSQVGGLW KNGLRFFRQG FDVRGAVPFG FCNAALNVGI SAGVILPLSR GFMELPSPVP DRFYLGGLSS PVCSLGVISS LLGFKTRGVG
401: PSEPQRSVPG ESVTVDAAAS TGRDYLGGDL AVSAFADLSF DLPLKLFRDN GIHGHAFLCA GNLAKLSEGE FKNFSFPEFR RTFRSSAGVG IVFPTSLFRM
501: ELNYCHILKK HEHDHGKSGI QFSFSLE
101: LRSAGTVQGL VRASSHANAL LRRLDVFDSV SITLDAGPPG FPGTANVTIQ VVEAARPYNR GIFFFPKKEV ISWPVEGWFM LKNLFGYGDM WDVSGEYGWD
201: QSSKIDIGVY LPRLKSIPTP LTARASILSE DWLKFSSYKE RLLGLKFGLL STWHHNLSYD LAWRTLTDPS QMASESIRRQ LGHNLLSALS YAYKIDKRDS
301: EFRPTKGYAF VSTSQVGGLW KNGLRFFRQG FDVRGAVPFG FCNAALNVGI SAGVILPLSR GFMELPSPVP DRFYLGGLSS PVCSLGVISS LLGFKTRGVG
401: PSEPQRSVPG ESVTVDAAAS TGRDYLGGDL AVSAFADLSF DLPLKLFRDN GIHGHAFLCA GNLAKLSEGE FKNFSFPEFR RTFRSSAGVG IVFPTSLFRM
501: ELNYCHILKK HEHDHGKSGI QFSFSLE
001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
Arabidopsis Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.