Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G382000.1 | Wheat | cytosol | 86.45 | 85.96 |
| TraesCS3A01G349400.1 | Wheat | cytosol | 86.07 | 85.74 |
| HORVU3Hr1G087800.9 | Barley | cytosol | 89.31 | 81.25 |
| EES01699 | Sorghum | cytosol | 70.42 | 68.97 |
| TraesCS2D01G101900.1 | Wheat | cytosol | 64.69 | 65.19 |
| Zm00001d012467_P001 | Maize | plasma membrane | 65.46 | 64.47 |
| TraesCS1D01G295900.1 | Wheat | cytosol | 64.31 | 64.44 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 56.68 | 55.41 |
| CDY00993 | Canola | cytosol | 50.95 | 53.94 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 53.24 | 53.24 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 55.73 | 52.71 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 53.63 | 52.62 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 52.48 | 52.48 |
| CDY00721 | Canola | nucleus | 50.38 | 52.38 |
| CDX73892 | Canola | nucleus | 50.76 | 52.16 |
| Bra001389.1-P | Field mustard | nucleus | 50.76 | 52.16 |
| AT5G05520.1 | Thale cress | cytosol | 52.1 | 52.1 |
| AT3G11070.1 | Thale cress | nucleus | 51.15 | 51.54 |
| CDY08552 | Canola | cytosol | 49.24 | 51.39 |
| Bra034868.1-P | Field mustard | cytosol | 49.24 | 51.39 |
| KRG97698 | Soybean | nucleus | 51.34 | 50.75 |
| KRH31173 | Soybean | nucleus | 50.76 | 50.38 |
| KRH73273 | Soybean | nucleus | 49.81 | 49.06 |
| TraesCS5D01G158200.2 | Wheat | cytosol | 47.71 | 48.54 |
| CDX98848 | Canola | cytosol | 48.66 | 48.48 |
| Bra009118.1-P | Field mustard | nucleus | 48.66 | 48.39 |
| CDX70145 | Canola | cytosol | 48.47 | 48.29 |
| KRH14921 | Soybean | cytosol | 48.09 | 47.1 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G343400.1 | EnsemblPlantsGene:TraesCS3D01G343400 | Gene3D:2.40.160.50 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0019867 |
| InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | PFAM:PF01103 | SEG:seg | MapMan:23.2.2.1 |
Description
No Description!
Coordinates
chr3D:+:455853331..455863136
Molecular Weight (calculated)
57670.4 Da
IEP (calculated)
7.004
GRAVY (calculated)
-0.217
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAADSTAE QAPNPAPHEP SDEPRKAPDQ PDRGEDNGVD FDEEEDDAEE LDGPAAYKEK VKAVFRRLHA EPVGIRVHDV IIRGNFKTRG SLIEAEVADL
101: LRSAGTVQGL VRASSHANAL LRRLDVFDSV SITLGAGPPE FPGTAIVTIQ VVEAARPYNR GIFFFPKKEV ISWPVEGWFM LKNLFGYGDM WNVSGEYGWD
201: QSSKIDIGVY LPRLKSIPTP LTARASILSE DWLKFSSYKQ RLLGLKFGLL STWHHNLSYD LAWRTLTDPS QMASESIRRQ LGHNLLSALS YAYKIDKRDS
301: EFRPTKGYAF VSTSQVGGLW KNGLRFFRQE FDGRGAVPLG FCNAALNVGI SAGVILPLSR GFMELSSPVP DRFYLGGLSS PVCSLGVISS LLGFKTRGVG
401: PSEPRRSVPG ESDAAASTGR DYLGGDLAVS AFADLSFDLP LKLFRDNGIH GHAFLCAGNL AKLSEGEFKN FSFPEFRRTF RSSAGVGIVF PTSLFRIELN
501: YCHILKKHEH DHGKSGIQFS FSLE
101: LRSAGTVQGL VRASSHANAL LRRLDVFDSV SITLGAGPPE FPGTAIVTIQ VVEAARPYNR GIFFFPKKEV ISWPVEGWFM LKNLFGYGDM WNVSGEYGWD
201: QSSKIDIGVY LPRLKSIPTP LTARASILSE DWLKFSSYKQ RLLGLKFGLL STWHHNLSYD LAWRTLTDPS QMASESIRRQ LGHNLLSALS YAYKIDKRDS
301: EFRPTKGYAF VSTSQVGGLW KNGLRFFRQE FDGRGAVPLG FCNAALNVGI SAGVILPLSR GFMELSSPVP DRFYLGGLSS PVCSLGVISS LLGFKTRGVG
401: PSEPRRSVPG ESDAAASTGR DYLGGDLAVS AFADLSFDLP LKLFRDNGIH GHAFLCAGNL AKLSEGEFKN FSFPEFRRTF RSSAGVGIVF PTSLFRIELN
501: YCHILKKHEH DHGKSGIQFS FSLE
001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
Arabidopsis Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.