Factsheet for TraesCS2D01G101900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G295900.1	Wheat	cytosol	93.85	93.31
TraesCS2A01G102400.1	Wheat	mitochondrion	49.81	92.5
TraesCS2B01G119500.1	Wheat	mitochondrion	86.35	90.34
HORVU1Hr1G070610.1	Barley	cytosol, mitochondrion, nucleus	93.85	83.42
Os05t0470800-01	Rice	mitochondrion	80.38	80.38
Zm00001d010590_P001	Maize	plasma membrane	77.88	76.85
EES19675	Sorghum	cytosol	77.69	76.23
TraesCS3D01G343400.1	Wheat	cytosol	65.19	64.69
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	60.58	60.11
PGSC0003DMT400020747	Potato	mitochondrion	60.38	59.92
GSMUA_Achr5P14260_001	Banana	cytosol	60.77	58.96
GSMUA_Achr4P18790_001	Banana	cytosol	60.96	57.22
KRG97698	Soybean	nucleus	55.77	54.72
VIT_13s0067g01510.t01	Wine grape	cytosol	56.15	54.68
CDY00993	Canola	cytosol	51.92	54.55
KRH31173	Soybean	nucleus	54.62	53.79
CDY00721	Canola	nucleus	51.54	53.17
AT5G05520.1	Thale cress	cytosol	53.27	52.86
CDY08552	Canola	cytosol	50.96	52.79
Bra034868.1-P	Field mustard	cytosol	50.96	52.79
CDX73892	Canola	nucleus	51.54	52.55
KRH73273	Soybean	nucleus	53.65	52.44
Bra001389.1-P	Field mustard	nucleus	51.35	52.35
TraesCS5D01G158200.2	Wheat	cytosol	50.19	50.68
KRH14921	Soybean	cytosol	51.92	50.47
AT3G11070.1	Thale cress	nucleus	49.81	49.81
Bra009118.1-P	Field mustard	nucleus	49.42	48.77
CDX70145	Canola	cytosol	48.85	48.29
CDX98848	Canola	cytosol	48.27	47.72

Protein Annotations

EnsemblPlants:TraesCS2D01G101900.1	EnsemblPlantsGene:TraesCS2D01G101900	Gene3D:2.40.160.50	Gene3D:3.10.20.310	GO:GO:0005575	GO:GO:0016020
GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	SEG:seg
MapMan:23.2.2.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:55140534..55142947

Molecular Weight (calculated)

56461.6 Da

IEP (calculated)

5.898

GRAVY (calculated)

-0.184

Length

520 amino acids

Sequence
(BLAST)

001: MADAADQNPK DAGNRVPEPW AGADGEIADE EYEYEEEEEL DERAAAALER EKVQSVFRRL SSDLVGIRVH DVIIRGNAKT REELIEAEVA DLLRSATTVQ
101: DLLSAAADAS ARLRGLDVFE AVNITLDAGP PELPGTTNVV IEVVEPAIPI SGNAGVFSKP EAKAWSLEGA VKWKNLAGYA DIWDASVAYG WDQTTEVGVG
201: VSLPRFKSIP TPLMARASLL SQDWMKFSSY KERLLGLSFG LLSTRHHDLS YNLTWRTLTD PSRLASTSIR RQLGHNLLSA LKYTYKIDQR DSHIRPTKGY
301: AFLSSSQVGG LWDNKGLNFF RQEFDARAAV PFGFWNAALN VGVGAGVVLP LARGFMNSST PVTDRFNLGG HSSPVCSLGG ISSLLGFRTR GVGPTEARRL
401: VPGASEDGSA AVPGRDYLGG DLAVSAFADL SFDLPLKVFR DAGIHGHAFL TAGNLVKLSE GQYKNLSLDE FRRSFRSSAG VGIILPTKLF RVEVNYCYIL
501: KQSQHDSGKT GIQFSFSSPS

Best Arabidopsis Sequence Match ( AT3G15860.1 )
(BLAST)

001: MDLNNNKSNN IVKTLARWCL LLQAFMISSN TVALKEPDYV NMNITIRNSM TGLIRPEIVY RCQSKRKDYG WHRSPKPGVQ FSFPIILIKG ETKIPAIHIC
101: QIRSVLGTAT LVIQNTYLDA EMCPRSSCAH EATPKGIVFR GLEWDFKTVF PKLKPVEYLE LPWTPWPNRT

Arabidopsis Description

Plant self-incompatibility protein S1 family protein [Source:UniProtKB/TrEMBL;Acc:Q5XVB9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.