Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009118.1-P | Field mustard | nucleus | 79.2 | 78.75 |
| CDX70145 | Canola | cytosol | 78.63 | 78.33 |
| CDX98848 | Canola | cytosol | 78.63 | 78.33 |
| AT3G11070.1 | Thale cress | nucleus | 75.38 | 75.96 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 60.31 | 60.31 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 59.73 | 59.73 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 59.35 | 58.24 |
| Zm00001d010590_P001 | Maize | plasma membrane | 56.49 | 56.17 |
| Os05t0470800-01 | Rice | mitochondrion | 55.53 | 55.96 |
| EES19675 | Sorghum | cytosol | 56.49 | 55.85 |
| KRG97698 | Soybean | nucleus | 55.53 | 54.91 |
| KRH31173 | Soybean | nucleus | 54.77 | 54.36 |
| KRH73273 | Soybean | nucleus | 55.15 | 54.32 |
| TraesCS2A01G102400.1 | Wheat | mitochondrion | 29.01 | 54.29 |
| TraesCS1B01G305000.1 | Wheat | cytosol | 52.67 | 53.91 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 54.58 | 53.36 |
| TraesCS2D01G101900.1 | Wheat | cytosol | 52.86 | 53.27 |
| TraesCS1A01G296200.1 | Wheat | cytosol | 52.29 | 52.79 |
| TraesCS1D01G295900.1 | Wheat | cytosol | 52.48 | 52.58 |
| EES01699 | Sorghum | cytosol | 53.63 | 52.52 |
| Zm00001d012467_P001 | Maize | plasma membrane | 53.24 | 52.44 |
| KRH14921 | Soybean | cytosol | 53.44 | 52.34 |
| TraesCS3B01G382000.1 | Wheat | cytosol | 52.48 | 52.18 |
| TraesCS3D01G343400.1 | Wheat | cytosol | 52.1 | 52.1 |
| TraesCS3A01G349400.1 | Wheat | cytosol | 51.91 | 51.71 |
| TraesCS2B01G119500.1 | Wheat | mitochondrion | 49.05 | 51.71 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 54.2 | 51.26 |
| Zm00001d041347_P001 | Maize | cytosol, peroxisome, plastid | 29.96 | 49.37 |
| HORVU3Hr1G087800.9 | Barley | cytosol | 53.24 | 48.44 |
| TraesCS4B01G365800.1 | Wheat | plastid | 25.95 | 47.55 |
| HORVU1Hr1G070610.1 | Barley | cytosol, mitochondrion, nucleus | 52.86 | 47.35 |
| TraesCS5D01G158200.2 | Wheat | cytosol | 43.7 | 44.47 |
| TraesCS5A01G152900.1 | Wheat | cytosol | 43.51 | 44.27 |
| TraesCS5B01G151700.1 | Wheat | cytosol | 43.32 | 44.08 |
| EES09088 | Sorghum | cytosol | 42.75 | 43.58 |
| EES16490 | Sorghum | cytosol | 42.56 | 43.13 |
| Zm00001d023220_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 42.37 | 43.11 |
Protein Annotations
| Gene3D:2.40.160.50 | MapMan:23.2.2.1 | Gene3D:3.10.20.310 | EntrezGene:830435 | ProteinID:AED90883.1 | ArrayExpress:AT5G05520 |
| EnsemblPlantsGene:AT5G05520 | RefSeq:AT5G05520 | TAIR:AT5G05520 | RefSeq:AT5G05520-TAIR-G | EnsemblPlants:AT5G05520.1 | TAIR:AT5G05520.1 |
| EMBL:AY059801 | EMBL:AY093246 | Unigene:At.24120 | ProteinID:BAB11541.1 | InterPro:Bac_surfAg_D15 | InterPro:BamA/TamA_POTRA |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0009536 |
| GO:GO:0016020 | GO:GO:0019867 | RefSeq:NP_568157.1 | PFAM:PF01103 | PFAM:PF07244 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | UniProt:Q9FFG3 | UniParc:UPI00000A7938 |
| SEG:seg | : | : | : | : | : |
Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
Coordinates
chr5:+:1632799..1635416
Molecular Weight (calculated)
58523.0 Da
IEP (calculated)
6.445
GRAVY (calculated)
-0.450
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.