Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G295900.1 | Wheat | cytosol | 97.69 | 96.94 |
| TraesCS1B01G305000.1 | Wheat | cytosol | 94.99 | 96.29 |
| TraesCS2A01G102400.1 | Wheat | mitochondrion | 48.75 | 90.36 |
| HORVU1Hr1G070610.1 | Barley | cytosol, mitochondrion, nucleus | 94.22 | 83.59 |
| Os05t0470800-01 | Rice | mitochondrion | 79.38 | 79.23 |
| Zm00001d010590_P001 | Maize | plasma membrane | 77.65 | 76.47 |
| EES19675 | Sorghum | cytosol | 77.65 | 76.04 |
| TraesCS3A01G349400.1 | Wheat | cytosol | 64.74 | 63.88 |
| Solyc04g079270.2.1 | Tomato | endoplasmic reticulum, nucleus | 60.31 | 59.73 |
| PGSC0003DMT400020747 | Potato | mitochondrion | 60.12 | 59.54 |
| GSMUA_Achr5P14260_001 | Banana | cytosol | 61.27 | 59.33 |
| GSMUA_Achr4P18790_001 | Banana | cytosol | 60.5 | 56.68 |
| CDY00993 | Canola | cytosol | 53.37 | 55.96 |
| CDY00721 | Canola | nucleus | 52.99 | 54.56 |
| KRG97698 | Soybean | nucleus | 55.49 | 54.34 |
| VIT_13s0067g01510.t01 | Wine grape | cytosol | 55.68 | 54.12 |
| KRH31173 | Soybean | nucleus | 54.91 | 53.98 |
| CDX73892 | Canola | nucleus | 52.79 | 53.73 |
| Bra001389.1-P | Field mustard | nucleus | 52.6 | 53.53 |
| Bra034868.1-P | Field mustard | cytosol | 51.64 | 53.39 |
| CDY08552 | Canola | cytosol | 51.64 | 53.39 |
| KRH73273 | Soybean | nucleus | 54.14 | 52.82 |
| AT5G05520.1 | Thale cress | cytosol | 52.79 | 52.29 |
| AT3G11070.1 | Thale cress | nucleus | 51.83 | 51.73 |
| KRH14921 | Soybean | cytosol | 52.41 | 50.84 |
| TraesCS5A01G152900.1 | Wheat | cytosol | 49.71 | 50.1 |
| Bra009118.1-P | Field mustard | nucleus | 50.48 | 49.72 |
| CDX70145 | Canola | cytosol | 50.1 | 49.43 |
| CDX98848 | Canola | cytosol | 49.33 | 48.67 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G296200.1 | EnsemblPlantsGene:TraesCS1A01G296200 | Gene3D:2.40.160.50 | Gene3D:3.10.20.310 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0019867 | InterPro:Bac_surfAg_D15 | PANTHER:PTHR12815 | PANTHER:PTHR12815:SF15 | PFAM:PF01103 | SEG:seg |
| MapMan:23.2.2.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:491135370..491139265
Molecular Weight (calculated)
56416.6 Da
IEP (calculated)
5.709
GRAVY (calculated)
-0.218
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAADQNPK DAGSRVPEPW AGADGEFAEE EYEYEDEEEL DEPAAAALQR EKVQSVFRRL STDPVGIRVH DVIIRGNAKT RDELIEAEVA DLLRSATTVQ
101: DLLSAAADAS ARLRGLDVFE AVNITLDSGP PELPGTTNVV IEVVEPAIPL SGNAGVYSKP EAKAWSVEGA VKWKNLAGYA DIWDASVAYG FDQTTEVGVG
201: VSLPRFKSIP TPLMARASLL SQDWMKFSSY KERILGLSLG LLSTRHHDLS YNLTWRTLTD PSRLASTSIR RQLGHNLLSA LKYTYKIDER DSHIRPTKGY
301: AFLSSSQVGG LWDNKGLKFF RQEFDVRAAV PFGFWNAALN VGVGAGVVLP LARGFMNSST PVTDRFNLGG HNSPVCSLGG ISSLLGFRTR GVGPTEPRRL
401: VPGESEDGSP AVPGRDYLGG DLAVSAFADL SFDLPLKVLR DAGIHGHAFL TAGNLAKLSE GQYKNFSLDE FRRSFRSTAG VGIILPTKLF RVEVNYCYIL
501: KQSQHDSGKT GIQFSFSSP
101: DLLSAAADAS ARLRGLDVFE AVNITLDSGP PELPGTTNVV IEVVEPAIPL SGNAGVYSKP EAKAWSVEGA VKWKNLAGYA DIWDASVAYG FDQTTEVGVG
201: VSLPRFKSIP TPLMARASLL SQDWMKFSSY KERILGLSLG LLSTRHHDLS YNLTWRTLTD PSRLASTSIR RQLGHNLLSA LKYTYKIDER DSHIRPTKGY
301: AFLSSSQVGG LWDNKGLKFF RQEFDVRAAV PFGFWNAALN VGVGAGVVLP LARGFMNSST PVTDRFNLGG HNSPVCSLGG ISSLLGFRTR GVGPTEPRRL
401: VPGESEDGSP AVPGRDYLGG DLAVSAFADL SFDLPLKVLR DAGIHGHAFL TAGNLAKLSE GQYKNFSLDE FRRSFRSTAG VGIILPTKLF RVEVNYCYIL
501: KQSQHDSGKT GIQFSFSSP
001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS
Arabidopsis Description
Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.