CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16490	Sorghum	cytosol	91.05	90.52
Zm00001d023220_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	87.16	86.99
Zm00001d041347_P001	Maize	cytosol, peroxisome, plastid	53.7	86.79
TraesCS5D01G158200.2	Wheat	cytosol	75.1	74.95
TraesCS5A01G152900.1	Wheat	cytosol	74.51	74.37
TraesCS5B01G151700.1	Wheat	cytosol	74.32	74.17
EES19675	Sorghum	cytosol	50.97	49.43
GSMUA_Achr5P14260_001	Banana	cytosol	50.0	47.95
GSMUA_Achr4P18790_001	Banana	cytosol	51.56	47.83
EES01699	Sorghum	cytosol	48.64	46.73
PGSC0003DMT400020747	Potato	mitochondrion	47.28	46.37
Solyc04g079270.2.1	Tomato	endoplasmic reticulum, nucleus	46.89	45.99
VIT_13s0067g01510.t01	Wine grape	cytosol	47.67	45.88
KRG97698	Soybean	nucleus	46.5	45.09
KRH31173	Soybean	nucleus	45.72	44.51
CDY00721	Canola	nucleus	42.8	43.65
CDY00993	Canola	cytosol	41.83	43.43
CDX73892	Canola	nucleus	43.0	43.33
KRH73273	Soybean	nucleus	44.75	43.23
Bra001389.1-P	Field mustard	nucleus	42.61	42.94
AT5G05520.1	Thale cress	cytosol	43.58	42.75
CDX98848	Canola	cytosol	42.41	41.44
Bra034868.1-P	Field mustard	cytosol	40.47	41.43
CDY08552	Canola	cytosol	40.47	41.43
AT3G11070.1	Thale cress	nucleus	41.83	41.35
KRH14921	Soybean	cytosol	42.8	41.12
Bra009118.1-P	Field mustard	nucleus	42.02	40.99
CDX70145	Canola	cytosol	41.63	40.68

Protein Annotations

EnsemblPlants:EES09088	EnsemblPlantsGene:SORBI_3005G004100	EntrezGene:8079967	Gene3D:2.40.160.50	GO:GO:0005575	GO:GO:0016020
GO:GO:0019867	InterPro:Bac_surfAg_D15	PANTHER:PTHR12815	PANTHER:PTHR12815:SF15	PFAM:PF01103	ProteinID:EES09088
ProteinID:EES09088.1	RefSeq:XP_002450100.1	SEG:seg	unigene:Sbi.975	UniParc:UPI0001A868DA	UniProt:C5Y2Z5
MapMan:23.2.2.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:330638..334281

Molecular Weight (calculated)

55186.2 Da

IEP (calculated)

5.366

GRAVY (calculated)

-0.179

Length

514 amino acids

Sequence
(BLAST)

001: MADTDPPPSV THDDDEDDDD EEFDDDLDDE ADDGGEPPAS SSEAARLEAV LRRLTADEVR IRVHQVTIRG CDRTRRAAVE AAVGLDLARA ATVRDLVRAA
101: AAAGDRLRRL GAFDTVSITL DAAPPGIPGS AVVVLVDVAE ARGRAAGDFG VFAHTQTRSC SLEGSVKLKN LFGFCETWDA SGALELDKTA ELSAGVQMPR
201: IGAIPTPLVA RISFLSDDWL KSSLKEHLMG VSVGLLSTMN HNLAYNLTWR KLTDPTRMSS NSVQEELGHS LLSSIKYAYK VDQRDSSIRP TRGYAFLSSS
301: QVGGLAPGSK YSRFLRQEFD VRVALPLGVL NGALNAGVAA GVIHPLERGS TGSVSPLLER FYLGGNRPLV CRLGGPSSLL GFKTRGLGAT ESRTYDPNNS
401: DNGTSSSPEL NGLGGDIAVT AFADLSFDLP LKPLRELGIH GHAFVCAGNL GKLTECDLRK FPVTDFLQTF RSSAGFGVVV PTRLFRIEMN YCYILKQLDH
501: DKGKTGIQFN FSSP

Best Arabidopsis Sequence Match ( AT5G05520.1 )
(BLAST)

001: MENPAEKPDP NPSKPKIESE DEREELGDIN GDEEEEEEYE EEDDGKPRTR EDAIADRIKA ESLFRRMRAT PVAVRVHDVI VKGNEKTKDH VIEAEVDVVR
101: QATTLQELLK ASKVANFNLQ ALDIFDSVKI TLDSGPPELP GTTNVVIDVV ESKSPITGQI GTFTKAEARS SSLEGSLKYK NIFGYGDIWD GSLAYGCDHS
201: AEVGLGMYLP RFRGRPTPFT SRVYLSTQDW LKFSSYKERA LGLSLGLIAS KYHELAYNIA WRNLIDPSQM ASRSIRRQLG HNLVSALKYT FKFDQRNSSL
301: RPTRGYSFIS TSQIGGLAPD SRTLRFLRQE IDLRYAVPLG FYRAALNFGI AGGITFPWGS GYKSRASCVP ERFFLGGNIS PVCSLGGPSA LWGFKTRGLG
401: PNEPRREVQD DESGDTYERD FVGGDVAVTA FADLSFDFPL KWFRDRGIHG HVFACAGNMA ELSENKYRNF TAPKLLETFR SSVGAGIVVP TSLFRMELNY
501: CHILKKQEHD RAKSGFFMTF STSS

Arabidopsis Description

Outer membrane OMP85 family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.