CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74650	Canola	nucleus, plastid	97.51	98.12
Bra035396.1-P	Field mustard	nucleus, plastid	97.36	97.97
AT5G35570.1	Thale cress	cytosol, plastid	91.76	90.49
KRH02613	Soybean	nucleus	69.05	70.7
KRH19306	Soybean	nucleus, plastid	68.74	70.61
VIT_11s0016g01190.t01	Wine grape	cytosol, plastid	68.27	69.24
KRH12531	Soybean	plastid	64.07	69.01
Solyc07g041750.2.1	Tomato	plastid	68.27	67.96
GSMUA_Achr9P16090_001	Banana	nucleus, peroxisome, plasma membrane	57.54	60.86
TraesCS5D01G215300.3	Wheat	nucleus, plasma membrane, plastid	59.25	60.57
TraesCS5A01G209100.1	Wheat	plastid	59.1	60.03
TraesCS5B01G207300.2	Wheat	cytosol, plasma membrane, plastid	58.94	59.97
Os09t0442900-01	Rice	cytosol, plasma membrane, plastid	59.25	59.72
HORVU5Hr1G061540.6	Barley	nucleus, plasma membrane, plastid	59.1	59.65
EER96805	Sorghum	plastid	60.03	59.57
CDX78207	Canola	plastid	44.63	44.5
CDX73509	Canola	plastid	44.17	44.1
Zm00001d020643_P002	Maize	plasma membrane, plastid	52.57	43.95
CDY55908	Canola	plastid	43.23	43.57
CDY60465	Canola	mitochondrion	30.33	43.33
CDY43245	Canola	cytosol	30.17	43.11
CDY40321	Canola	plastid	43.7	43.1
CDY10480	Canola	plastid	43.39	42.6
CDY04145	Canola	cytosol	24.11	42.23
CDY18704	Canola	mitochondrion	33.28	41.88
CDX78650	Canola	golgi	32.97	41.73
CDX81230	Canola	mitochondrion	32.97	41.65
CDX70647	Canola	golgi	32.81	41.62
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	32.19	41.57
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	32.19	41.48
CDX70637	Canola	golgi	32.81	41.37
CDY26456	Canola	golgi	32.5	41.14
CDX69504	Canola	golgi	32.5	41.06
CDY18412	Canola	plastid	45.88	40.97
CDX93336	Canola	plastid	45.88	40.58
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	30.02	40.55
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	36.55	40.24
CDX91985	Canola	golgi	31.73	39.69
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	31.57	39.49
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	31.42	39.22
CDY07758	Canola	plastid	43.55	39.0
CDY14499	Canola	plastid	43.39	38.86
CDY34713	Canola	cytosol	27.53	37.98
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	22.86	37.89
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	27.06	37.74
CDY04814	Canola	golgi	31.1	35.97
CDY69289	Canola	cytosol	21.31	34.6
CDY53645	Canola	mitochondrion	28.46	34.53
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	28.46	34.4
CDY32271	Canola	plastid	28.77	33.64
CDX90501	Canola	mitochondrion	28.93	33.63
CDY60713	Canola	mitochondrion	28.93	33.63
CDY40517	Canola	mitochondrion	28.62	33.39
CDY29524	Canola	extracellular, golgi, plasma membrane	28.46	32.45
CDY31477	Canola	extracellular, golgi, plasma membrane	28.15	32.09
CDY64279	Canola	golgi	27.06	31.52
CDY54803	Canola	golgi	27.06	31.52
CDX87622	Canola	nucleus	26.91	30.78
CDX73250	Canola	golgi	27.68	30.64
CDX68121	Canola	nucleus, plastid	4.82	22.79
CDX69362	Canola	nucleus, plastid	4.82	22.79
CDX70375	Canola	nucleus, plastid	4.82	22.79
CDY13557	Canola	nucleus, plastid	4.82	22.79
CDX78406	Canola	nucleus, plastid	4.82	22.79
CDY39044	Canola	nucleus, plastid	4.82	22.79
CDX85735	Canola	nucleus, plastid	4.82	22.79
CDX85906	Canola	nucleus, plastid	4.82	22.79
CDY69490	Canola	nucleus, plastid	4.82	22.79
CDY68289	Canola	nucleus, plastid	4.82	22.79

Protein Annotations

KEGG:00052+2.4.1.22	KEGG:00514+2.4.1.221	MapMan:35.1	GO:A0A078H857	UniProt:A0A078H857	EnsemblPlants:CDY33687
ProteinID:CDY33687	ProteinID:CDY33687.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSBRNA2T00055065001	PFAM:PF10250	PIRSF:PIRSF009360
PANTHER:PTHR31741	PANTHER:PTHR31741:SF8	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EE6E9E	SEG:seg

Description

BnaC04g29640DBnaC04g29640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H857]

Coordinates

chrLK032320:+:106857..110158

Molecular Weight (calculated)

72351.8 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.481

Length

643 amino acids

Sequence
(BLAST)

001: MGHHHHDGGD GVPQHVNSPR FSGPMTRRAQ SFKRGGSGGS SSNTHIGGDN SNNNSSSTLR VHHEIDLPLN SPRSEIASGS GLDPSGGFES AMSRKHQTYG
101: QLRERVVRGL LRKPMVSEFS LRERKKLGHW MFFAFCGVCL FMGVFKICAT GWFGSAIDAA AASDQDLSDS IPRVNLLDHD YIYKSDVDPS LLGDGNSVVE
201: YSGVWAKPES GNYSQCIDSL RRRKKLAANT NGYLLINANG GLNQMRFGIC DMVAVAKIMK ATLVLPSLDH SSYWADDSGF KDLFDWQHFI EELEDDIHIV
301: ETLPSELAGV EPFVKTPISW SKVGYYKKEV LPLLKQHIVM YLTHTDSRLA NNDLPDSVQK LRCRVNYRAL KYSAPIEELG NVLVSRMRQN RGPYLALHLR
401: QVALFILSNL YEKDMLAFTG CSHSLTAEED EELRQMRYEV AHWKEKEING TERRLQGGCP LTPRETSLLL RALEFPSSSR IYLVAGEAYG NGSMDPLNTD
501: YPNIFSHSTL ATKEELSPFN NHQNMLAGLD YIVALQSEVF LYTYDGNMAK AVQGHRRFEN FKKTINPDKM SFVKLVDALD EGRISWKKFS SKVKKLHKDR
601: NGAPYNRESG EFPKLEESFY ANPLPGCICE TTDEEEESMM RRT

Best Arabidopsis Sequence Match ( AT5G35570.1 )
(BLAST)

001: MGHHHDGGDG VPQHHVNSPR FSGPMTRRAQ SFKRGGSAGS SSNNNNTHVG VSGGDGNNNN NTSSTLRVHH EIDLPLNSPR SEIVSGSSGS DPSGGFDSAL
101: NRKHQTYGQL RERVVKGLLR KPMGSVVSDF SLRERKKLGH WMFFAFCGVC LFLGVFKICA TGWLGSAIDG AASDQDLSIP RVNLLDHSSH DYIYKDGGND
201: VDPTLVMVAS DVVGDQNSVV EFSGVWAKPE SGNFSRCIDS SRSRKKLGAN TNGYLLINAN GGLNQMRFGI CDMVAVAKIM KATLVLPSLD HSSYWADDSG
301: FKDLFDWQHF IEELKDDIHI VEMLPSELAG IEPFVKTPIS WSKVGYYKKE VLPLLKQHIV MYLTHTDSRL ANNDLPDSVQ KLRCRVNYRA LKYSAPIEEL
401: GNVLVSRMRQ DRGPYLALHL RYEKDMLAFT GCSHSLTAEE DEELRQMRYE VSHWKEKEIN GTERRLQGGC PLTPRETSLL LRALEFPSSS RIYLVAGEAY
501: GNGSMDPLNT DFPNIFSHSI LATKEELSPF NNHQNMLAGL DYIVALQSEV FLYTYDGNMA KAVQGHRRFE DFKKTINPDK MNFVKLVDAL DEGRISWKKF
601: SSKVKKLHKD RNGAPYNRES GEFPKLEESF YANPLPGCIC ENTEEEGLMR RT

Arabidopsis Description

OFUT35O-fucosyltransferase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q94BY4]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.