CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
endoplasmic reticulum 1
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	100.0	100.0
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	97.59	97.39
AT1G14020.1	Thale cress	cytosol, endoplasmic reticulum, golgi	93.57	93.39
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	75.9	82.0
PGSC0003DMT400072871	Potato	cytosol, extracellular	60.44	77.38
CDY04145	Canola	cytosol	56.02	76.02
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	72.49	75.84
Solyc01g010930.2.1	Tomato	cytosol, extracellular	40.16	74.91
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	72.89	72.17
KRH50557	Soybean	cytosol	71.69	71.54
KRG89556	Soybean	mitochondrion, plastid	51.41	71.11
KRH74924	Soybean	cytosol	70.48	69.37
KRH70785	Soybean	cytosol, nucleus, vacuole	69.48	68.38
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	64.86	66.05
EER92792	Sorghum	endoplasmic reticulum, golgi	60.44	65.72
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	60.84	64.33
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	59.04	64.19
Os03t0169000-01	Rice	endoplasmic reticulum, golgi, vacuole	59.84	63.95
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	60.24	63.69
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	60.24	63.69
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	59.64	63.33
CDY43245	Canola	cytosol	52.21	57.78
CDY60465	Canola	mitochondrion	52.01	57.56
CDY26456	Canola	golgi	57.63	56.5
CDX70647	Canola	golgi	57.23	56.21
CDX69504	Canola	golgi	57.43	56.19
CDX78650	Canola	golgi	57.23	56.1
CDX70637	Canola	golgi	57.23	55.88
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	58.84	53.96
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	55.42	53.7
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	55.42	53.59
CDX91985	Canola	golgi	54.82	53.11
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	40.36	51.8
CDY34713	Canola	cytosol	46.79	50.0
CDX81230	Canola	mitochondrion	39.56	38.7
CDY18704	Canola	mitochondrion	39.56	38.55
CDY69289	Canola	cytosol	29.52	37.12
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	38.35	35.9
CDY53645	Canola	mitochondrion	37.75	35.47
CDY40517	Canola	mitochondrion	38.35	34.66
CDY32271	Canola	plastid	38.15	34.55
CDY04814	Canola	golgi	38.55	34.53
CDX90501	Canola	mitochondrion	37.95	34.18
CDY60713	Canola	mitochondrion	37.35	33.63
CDY33687	Canola	nucleus, plastid	41.57	32.19
CDX74650	Canola	nucleus, plastid	41.16	32.08
CDY55908	Canola	plastid	40.16	31.35
CDY54803	Canola	golgi	34.14	30.8
CDX78207	Canola	plastid	39.76	30.7
CDY64279	Canola	golgi	33.94	30.62
CDX73509	Canola	plastid	39.16	30.28
CDY40321	Canola	plastid	39.56	30.21
CDY10480	Canola	plastid	39.36	29.92
CDX87622	Canola	nucleus	33.53	29.72
CDY29524	Canola	extracellular, golgi, plasma membrane	33.33	29.43
CDX73250	Canola	golgi	34.34	29.43
CDY31477	Canola	extracellular, golgi, plasma membrane	33.13	29.26
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	33.53	28.6
CDY18412	Canola	plastid	41.16	28.47
CDX93336	Canola	plastid	41.16	28.2
CDY07758	Canola	plastid	39.76	27.58
CDY14499	Canola	plastid	39.56	27.44
CDX68121	Canola	nucleus, plastid	6.43	23.53
CDY68289	Canola	nucleus, plastid	6.43	23.53
CDX85906	Canola	nucleus, plastid	6.43	23.53
CDX85735	Canola	nucleus, plastid	6.43	23.53
CDX69362	Canola	nucleus, plastid	6.43	23.53
CDX70375	Canola	nucleus, plastid	6.43	23.53
CDY13557	Canola	nucleus, plastid	6.43	23.53
CDY39044	Canola	nucleus, plastid	6.43	23.53
CDX78406	Canola	nucleus, plastid	6.43	23.53
CDY69490	Canola	nucleus, plastid	6.43	23.53

Protein Annotations

EnsemblPlants:CDX96871	EnsemblPlantsGene:GSBRNA2T00103115001	GO:A0A078E6M2	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	KEGG:00052+2.4.1.22
KEGG:00514+2.4.1.221	PANTHER:PTHR31741	PANTHER:PTHR31741:SF3	PFAM:PF10250	PIRSF:PIRSF009360	ProteinID:CDX96871
ProteinID:CDX96871.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002545C80	UniPathway:UPA00378	MapMan:21.3.2.1.1

Description

BnaA08g24140D

Coordinates

chrLK031895:-:1298928..1301352

Molecular Weight (calculated)

57266.0 Da

IEP (calculated)

8.812

GRAVY (calculated)

-0.367

Length

498 amino acids

Sequence
(BLAST)

001: MEVRSDSNQG RSGDNKLPSP AAPKPRVQVW FVTVCSTILI WTCLVQLFAA GELWRTRIFT GQVSRFSAPV EPVPLPPPLP PARNYTSNGV LLVSCNGGLN
101: QMRSAICDMV TVARLLNLTL VVPELDKTSF WADPSGFEDI FDVRHFIDSL RDEVRIFRRL PKRYSSKYGY KMFEMPPVSW SDENYYLKQV LPLFSKHKVV
201: HFNRTDTRLA NNGLSLPLQW LRCRVNFQGL KFTPQLEALG SKLVRILQQR GPFVALHLRY EMDMLAFSGC THGCSEEEAE ELKKMRYTYP WWREKEINSE
301: ERRAQGLCPL TPEEVALVLK ALGFDKNTQI YIAAGEIYGS EHRLSVLREA FPRIVKKEML LESAELQQFQ NHSSQMAALD FMVSVASNTF IPTYDGNMAK
401: VVEGHRRYLG FKKTILLDRK RLVELLDLHH NKTLTWDQFA VAVKEAHERR TGAPTHRRVI SDKPKEEDYF YANPQECLCE GTNCHDLYGH RNNSSLTR

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.