CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
vacuole 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, vacuole
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037783.1-P	Field mustard	mitochondrion	96.66	96.85
CDY18704	Canola	mitochondrion	97.05	96.67
AT5G64600.1	Thale cress	mitochondrion	88.8	86.59
VIT_04s0044g01200.t01	Wine grape	endoplasmic reticulum, golgi	67.58	68.94
KRH53889	Soybean	mitochondrion, plastid	66.21	66.08
KRH64055	Soybean	golgi, mitochondrion	66.01	66.01
GSMUA_Achr10P...	Banana	golgi, mitochondrion, vacuole	63.06	65.64
Solyc11g005870.1.1	Tomato	mitochondrion	63.46	65.52
EES15789	Sorghum	mitochondrion	60.71	63.06
TraesCS2D01G352800.1	Wheat	mitochondrion	60.31	62.91
HORVU2Hr1G086020.2	Barley	mitochondrion	60.31	62.91
Zm00001d041823_P003	Maize	mitochondrion, vacuole	60.31	62.78
TraesCS2B01G372800.1	Wheat	mitochondrion	59.92	62.5
TraesCS2A01G355500.1	Wheat	mitochondrion	59.73	62.3
Os12t0190100-01	Rice	golgi, mitochondrion, plasma membrane	59.73	61.41
CDY04145	Canola	cytosol	33.79	46.87
CDY04814	Canola	golgi	50.69	46.4
CDY43245	Canola	cytosol	39.29	44.44
CDY60465	Canola	mitochondrion	39.1	44.22
CDY26456	Canola	golgi	41.85	41.93
CDX69504	Canola	golgi	41.85	41.85
CDX70647	Canola	golgi	41.45	41.62
CDX70637	Canola	golgi	41.65	41.57
CDX78650	Canola	golgi	41.45	41.54
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	38.7	41.39
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	40.27	39.88
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	40.27	39.81
CDX91985	Canola	golgi	40.08	39.69
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	38.7	39.56
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	38.7	39.48
CDY69289	Canola	cytosol	29.86	38.38
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	29.08	38.14
CDY34713	Canola	cytosol	33.79	36.91
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	31.83	35.14
CDY55908	Canola	plastid	43.22	34.48
CDX73509	Canola	plastid	42.44	33.54
CDX78207	Canola	plastid	42.44	33.49
CDY53645	Canola	mitochondrion	34.77	33.4
CDY54803	Canola	golgi	36.15	33.33
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	34.77	33.27
CDY40321	Canola	plastid	42.44	33.13
CDX74650	Canola	nucleus, plastid	41.45	33.02
CDY64279	Canola	golgi	35.76	32.97
CDY33687	Canola	nucleus, plastid	41.65	32.97
CDY10480	Canola	plastid	42.04	32.67
CDY31477	Canola	extracellular, golgi, plasma membrane	35.95	32.45
CDY60713	Canola	mitochondrion	35.17	32.37
CDX90501	Canola	mitochondrion	35.17	32.37
CDY32271	Canola	plastid	34.97	32.36
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	36.94	32.19
CDY40517	Canola	mitochondrion	34.77	32.12
CDY29524	Canola	extracellular, golgi, plasma membrane	35.56	32.09
CDX87622	Canola	nucleus	34.38	31.14
CDY18412	Canola	plastid	43.22	30.56
CDX73250	Canola	golgi	34.77	30.46
CDX93336	Canola	plastid	43.22	30.26
CDX68121	Canola	nucleus, plastid	8.06	30.15
CDX70375	Canola	nucleus, plastid	8.06	30.15
CDX69362	Canola	nucleus, plastid	8.06	30.15
CDY69490	Canola	nucleus, plastid	8.06	30.15
CDY68289	Canola	nucleus, plastid	8.06	30.15
CDY39044	Canola	nucleus, plastid	8.06	30.15
CDY13557	Canola	nucleus, plastid	8.06	30.15
CDX85906	Canola	nucleus, plastid	8.06	30.15
CDX85735	Canola	nucleus, plastid	8.06	30.15
CDX78406	Canola	nucleus, plastid	8.06	30.15
CDY14499	Canola	plastid	41.85	29.67
CDY07758	Canola	plastid	41.65	29.53

Protein Annotations

EnsemblPlants:CDX81230	EnsemblPlantsGene:GSBRNA2T00134704001	GO:A0A078CWI6	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	KEGG:00052+2.4.1.22
KEGG:00514+2.4.1.221	PANTHER:PTHR31741	PANTHER:PTHR31741:SF15	PFAM:PF10250	PIRSF:PIRSF009360	ProteinID:CDX81230
ProteinID:CDX81230.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EF1A61	UniPathway:UPA00378	MapMan:35.1

Description

BnaC09g06410D

Coordinates

chrLK031824:+:260138..262642

Molecular Weight (calculated)

58595.2 Da

IEP (calculated)

9.997

GRAVY (calculated)

-0.561

Length

509 amino acids

Sequence
(BLAST)

001: MVKHRSSSRL SSSSARFFSR KAVPLYLIFI FAFTIWILVF TSRNIQTDDQ TQDHQQNHQH RDSRKNLQKK RSEDLDSQLW TPPFSYGLHP CVKPSSRYKE
101: FIESDRYITV RSNGGLNQMR TGIADMVAVA HIMNATLVIP ELDKRSFWRD SSVFSDIFDE EHFIKSLGRD VKVIKKLPKE VESLPRARKH FTSWASVGYY
201: EEMTHLWKEY KVIHVAKSDS RLANNDLPID IQRLRCRVLY RGLRFSPPIE TLGQKLVERL KSRAGRFIAL HLRYEKDMLA FTGCTYGLTD AESEELRVMR
301: ESTSHWKIKS INSTEQRVEG LCPLTPKEVG IFLKGLGYPE STVIYIAAGE IYGGDDRLLD LKSRFPNLVF KETLAGEEEL EGFTGHATKT AALDYIISVE
401: SDVFVPSHSG NMARAVEGHR RFLGHRRTIT PDRKGLVKLF DKVERGQMKE GAKFSNLVKA MHQDRQGAPR RRKGPAQGIK GRARFRTEEA FYENPYPECI
501: CSSKEHKEP

Best Arabidopsis Sequence Match ( AT5G64600.1 )
(BLAST)

001: MVKHRNSSRS IISYSSSIAR FFSRKAISLY LIFVFAFTIW VLVFSSRNIQ TDDDHTKHQQ QHHRDLIDSE SFPPPYLPPR KNLQKPYENT QLWTPPFSFG
101: LHPCVKPTPK YKEFSESDHY ITVKSNGGLN QMRTGIADIV AVAHIMNATL VIPELDKRSF WQDSSVFSDI FDEEQFIKSL RRDVKVIKKL PKEVESLPRA
201: RKHFTSWSSV GYYEEMTHLW KEYKVIHVAK SDSRLANNDL PIDVQRLRCR VLYRGLCFSP AIESLGQKLV ERLKSRAGRY IALHLRYEKD MLAFTGCTYG
301: LTDAESEELR VMRESTSHWK IKSINSTEQR EEGLCPLTPK EVGIFLKGLG YSQSTVIYIA AGEIYGGDDR LSELKSRFPN LVFKETLAGN EELKGFTGHA
401: TKTAALDYII SVESDVFVPS HSGNMARAVE GHRRFLGHRR TITPDRKGLV KLFVKMERGQ LKEGPKLSNF VNQMHKDRQG APRRRKGPTQ GIKGRARFRT
501: EEAFYENPYP ECICSSKEHK EP

Arabidopsis Description

OFUT38O-fucosyltransferase 38 [Source:UniProtKB/Swiss-Prot;Acc:F4KF16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.