Factsheet for Solyc11g005870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
vacuole 2
golgi 3
extracellular 1
plasma membrane 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01200.t01	Wine grape	endoplasmic reticulum, golgi	72.62	71.74
KRH53889	Soybean	mitochondrion, plastid	69.37	67.06
KRH64055	Soybean	golgi, mitochondrion	68.56	66.4
GSMUA_Achr10P...	Banana	golgi, mitochondrion, vacuole	65.52	66.05
CDX81230	Canola	mitochondrion	65.52	63.46
Bra037783.1-P	Field mustard	mitochondrion	65.11	63.19
CDY18704	Canola	mitochondrion	65.11	62.82
AT5G64600.1	Thale cress	mitochondrion	66.33	62.64
Zm00001d041823_P003	Maize	mitochondrion, vacuole	61.87	62.37
EES15789	Sorghum	mitochondrion	61.87	62.24
HORVU2Hr1G086020.2	Barley	mitochondrion	61.46	62.09
Os12t0190100-01	Rice	golgi, mitochondrion, plasma membrane	62.07	61.82
TraesCS2D01G352800.1	Wheat	mitochondrion	61.05	61.68
TraesCS2A01G355500.1	Wheat	mitochondrion	60.85	61.48
TraesCS2B01G372800.1	Wheat	mitochondrion	60.65	61.27
Solyc01g010930.2.1	Tomato	cytosol, extracellular	26.37	48.69
Solyc04g074670.2.1	Tomato	mitochondrion	51.12	47.1
Solyc06g069380.2.1	Tomato	mitochondrion	40.97	40.89
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	40.77	39.96
Solyc03g114730.2.1	Tomato	cytosol	40.16	39.68
Solyc12g038670.1.1	Tomato	cytosol	40.77	39.41
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	40.37	37.76
Solyc12g098400.1.1	Tomato	unclear	36.51	33.71
Solyc09g011860.2.1	Tomato	plastid	43.2	33.07
Solyc06g060750.2.1	Tomato	mitochondrion	35.5	32.41
Solyc10g085050.1.1	Tomato	cytosol	39.35	32.17
Solyc07g041750.2.1	Tomato	plastid	41.99	32.04
Solyc12g094590.1.1	Tomato	unclear	37.53	31.2
Solyc01g112070.2.1	Tomato	nucleus	34.08	31.0
Solyc11g010230.1.1	Tomato	nucleus	8.52	30.88
Solyc04g081150.2.1	Tomato	nucleus, plastid	8.52	30.88
Solyc04g074580.1.1	Tomato	nucleus, plastid	8.52	30.88
Solyc05g051500.2.1	Tomato	nucleus, plastid	8.52	30.88
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	34.28	28.55
Solyc10g074490.1.1	Tomato	golgi	36.71	28.06

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005975	GO:GO:0006004
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
UniProt:K4D4K0	PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF15	EnsemblPlantsGene:Solyc11g005870.1
EnsemblPlants:Solyc11g005870.1.1	TMHMM:TMhelix	UniParc:UPI0002769A99	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:-:691719..702561

Molecular Weight (calculated)

56572.8 Da

IEP (calculated)

9.529

GRAVY (calculated)

-0.455

Length

493 amino acids

Sequence
(BLAST)

001: MGNRGHTQYR TTRRTSNFSI TLYIFLFFVL SMFVFFYYTK DIVEDEQKLV LASEKKEEPE FDENEDNSVW EASKSHGLHP CIKPTAKYKA ALGWKRYLTV
101: KSNGGLNQMR TGIADMVAVA HVMNATLVIP QLDKRSFWQD SSTFSDIFDE NHFIKALRGD LMIIKELPKE IESLPRARKH FTSWSGVGYY EEMTQLWKEH
201: QVIHVAKSDS RLANNELPLD IQRLRCRALY SALRFSPPIE RLGKKLVEQL RTRAKRYVAL HLRYEKDMLS FTGCTYGLTD AEAEELRVMR EKTNHWKIKV
301: INSTEQRIGG FCPLTPKEVG LFLQALGYPP STFIYIAAGE IYGGNTRLSE LKSYFPNVVF KEMLATPELR EFANHASQAA ALDYLISVES DVFIPSHSGN
401: MARAVEGHRR FLGHRKTITP DRKGLVEIFD QLEAGQLDGS SFSHLVRHLH KNRQGAPRKR AGAPPGVRGR ARSRLEESFY QNPYPECICS SRE

Best Arabidopsis Sequence Match ( AT5G64600.1 )
(BLAST)

001: MVKHRNSSRS IISYSSSIAR FFSRKAISLY LIFVFAFTIW VLVFSSRNIQ TDDDHTKHQQ QHHRDLIDSE SFPPPYLPPR KNLQKPYENT QLWTPPFSFG
101: LHPCVKPTPK YKEFSESDHY ITVKSNGGLN QMRTGIADIV AVAHIMNATL VIPELDKRSF WQDSSVFSDI FDEEQFIKSL RRDVKVIKKL PKEVESLPRA
201: RKHFTSWSSV GYYEEMTHLW KEYKVIHVAK SDSRLANNDL PIDVQRLRCR VLYRGLCFSP AIESLGQKLV ERLKSRAGRY IALHLRYEKD MLAFTGCTYG
301: LTDAESEELR VMRESTSHWK IKSINSTEQR EEGLCPLTPK EVGIFLKGLG YSQSTVIYIA AGEIYGGDDR LSELKSRFPN LVFKETLAGN EELKGFTGHA
401: TKTAALDYII SVESDVFVPS HSGNMARAVE GHRRFLGHRR TITPDRKGLV KLFVKMERGQ LKEGPKLSNF VNQMHKDRQG APRRRKGPTQ GIKGRARFRT
501: EEAFYENPYP ECICSSKEHK EP

Arabidopsis Description

OFUT38O-fucosyltransferase 38 [Source:UniProtKB/Swiss-Prot;Acc:F4KF16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.