Factsheet for Solyc01g010930.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04145	Canola	cytosol	70.04	50.95
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	83.15	44.14
AT1G14020.1	Thale cress	cytosol, endoplasmic reticulum, golgi	77.15	41.28
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	71.91	40.34
EER92792	Sorghum	endoplasmic reticulum, golgi	68.91	40.17
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	74.91	40.16
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	74.91	40.16
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	74.91	40.08
KRH50557	Soybean	cytosol	74.91	40.08
Os03t0169000-01	Rice	endoplasmic reticulum, golgi, vacuole	68.54	39.27
KRH70785	Soybean	cytosol, nucleus, vacuole	74.16	39.13
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	68.91	39.07
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	68.91	39.07
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	68.91	39.07
KRH74924	Soybean	cytosol	73.78	38.93
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	66.67	38.86
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	70.79	38.65
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	67.79	38.59
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	71.54	37.6
KRG89556	Soybean	mitochondrion, plastid	50.19	37.22
Solyc06g069380.2.1	Tomato	mitochondrion	63.3	34.21
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	58.8	34.06
Solyc03g114730.2.1	Tomato	cytosol	61.8	33.07
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	66.29	32.6
Solyc12g038670.1.1	Tomato	cytosol	62.17	32.55
Bra017390.1-P	Field mustard	nucleus	70.41	27.61
Solyc11g005870.1.1	Tomato	mitochondrion	48.69	26.37
Solyc04g074670.2.1	Tomato	mitochondrion	48.69	24.3
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	47.19	23.91
Solyc06g060750.2.1	Tomato	mitochondrion	46.82	23.15
Solyc12g098400.1.1	Tomato	unclear	44.19	22.1
Solyc10g085050.1.1	Tomato	cytosol	49.06	21.72
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	46.82	21.11
Solyc01g112070.2.1	Tomato	nucleus	42.32	20.85
Solyc12g094590.1.1	Tomato	unclear	44.57	20.07
Solyc09g011860.2.1	Tomato	plastid	47.57	19.72
Solyc07g041750.2.1	Tomato	plastid	46.82	19.35
Solyc10g074490.1.1	Tomato	golgi	43.07	17.83
Solyc11g010230.1.1	Tomato	nucleus	5.62	11.03
Solyc05g051500.2.1	Tomato	nucleus, plastid	5.62	11.03
Solyc04g081150.2.1	Tomato	nucleus, plastid	5.62	11.03
Solyc04g074580.1.1	Tomato	nucleus, plastid	5.62	11.03

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	UniProt:K4ATT6	PFAM:PF10250	PANTHER:PTHR31741
PANTHER:PTHR31741:SF3	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g010930.2	EnsemblPlants:Solyc01g010930.2.1	UniParc:UPI0002761ED7	SEG:seg

Description

No Description!

Coordinates

chr1:-:6454334..6464408

Molecular Weight (calculated)

30881.4 Da

IEP (calculated)

7.086

GRAVY (calculated)

-0.188

Length

267 amino acids

Sequence
(BLAST)

001: MRAAICDMVT VARLLNLTLV VPELDKSSFW ADPSNFEDIF DVRHFIDSLR DEVNIIKRLP KKVARSYGYH PVVMPPVSWS SEKYYLQQIL PLFSKHQVVN
101: FNRTDTRLAN NGIPLELQRL RCQVNFHALK FTQKIEALGQ KLVHMLQQRG PFVALHLRYE MDMLAFSGCT EGCTEEEAEE LKQLRYAFPW WKEKEIVSDE
201: KRSQGLCPLT PEETTLILQA LGIEKNMQIY IASGDIYGSE QRLATLRTAF PKIVSVNCFF SFPLPDY

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.