Factsheet for Solyc03g096370.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, nucleus

Predictor Summary:

plastid 2
golgi 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
MultiLoc:	golgi
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036338	Potato	cytosol, golgi, mitochondrion	92.79	91.4
VIT_13s0019g03250.t01	Wine grape	cytosol	51.42	59.3
Os05t0451900-01	Rice	cytosol	44.59	55.95
OQU87869	Sorghum	mitochondrion	46.87	52.67
KRH73118	Soybean	mitochondrion	51.61	51.91
KRH15012	Soybean	cytosol	51.42	51.72
Solyc01g010930.2.1	Tomato	cytosol, extracellular	23.91	47.19
TraesCS3B01G397600.1	Wheat	plastid	48.77	46.73
TraesCS3D01G358900.2	Wheat	plastid	48.39	46.2
TraesCS3A01G365800.1	Wheat	plastid	48.58	46.04
Solyc09g011860.2.1	Tomato	plastid	56.17	45.96
Zm00001d038263_P001	Maize	plastid	49.91	45.9
GSMUA_Achr5P28820_001	Banana	plastid	45.92	45.83
Zm00001d012362_P001	Maize	plastid	46.68	45.14
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	49.72	45.09
KXG22127	Sorghum	plastid	51.61	44.52
Solyc10g085050.1.1	Tomato	cytosol	50.85	44.44
Os01t0851100-02	Rice	plastid	36.05	44.39
TraesCS1B01G288800.1	Wheat	plastid	50.09	43.71
HORVU1Hr1G073150.1	Barley	plastid	49.53	43.57
Zm00001d010112_P001	Maize	cytosol, plastid	47.63	43.43
TraesCS1A01G279800.1	Wheat	plastid	50.09	43.42
TraesCS1D01G279000.1	Wheat	plastid	45.92	42.46
Solyc11g005870.1.1	Tomato	mitochondrion	37.76	40.37
Solyc07g041750.2.1	Tomato	plastid	48.39	39.47
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	37.0	38.77
Solyc04g074670.2.1	Tomato	mitochondrion	37.76	37.2
Solyc06g069380.2.1	Tomato	mitochondrion	34.54	36.84
Solyc03g114730.2.1	Tomato	cytosol	34.35	36.27
Solyc12g038670.1.1	Tomato	cytosol	34.35	35.49
Solyc12g098400.1.1	Tomato	unclear	30.36	29.96
Solyc06g060750.2.1	Tomato	mitochondrion	29.6	28.89
Solyc01g112070.2.1	Tomato	nucleus	28.84	28.04
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	30.17	26.86
Solyc12g094590.1.1	Tomato	unclear	29.98	26.64
Solyc11g010230.1.1	Tomato	nucleus	6.45	25.0
Solyc05g051500.2.1	Tomato	nucleus, plastid	6.45	25.0
Solyc04g081150.2.1	Tomato	nucleus, plastid	6.45	25.0
Solyc04g074580.1.1	Tomato	nucleus, plastid	6.45	25.0
Solyc10g074490.1.1	Tomato	golgi	30.17	24.65

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	UniProt:K4BJ58
PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	EnsemblPlantsGene:Solyc03g096370.2	EnsemblPlants:Solyc03g096370.2.1
TMHMM:TMhelix	UniParc:UPI0002767C0D	:	:	:	:

Description

No Description!

Coordinates

chr3:+:58412563..58415176

Molecular Weight (calculated)

60612.3 Da

IEP (calculated)

9.939

GRAVY (calculated)

-0.411

Length

527 amino acids

Sequence
(BLAST)

001: MSNSPLATGT ITTRRRPIDS VEYAEENGNG KVNIGHHKHR RISSSVNSLL RPGRYLSRWI FGALILLMIS TMFVKIILIH LFLRVNATTT SHHDFLQLPR
101: HVMHAQNSEI WANLGSDKFY KCIDRSSIKI KDKSMSNGYI LVHANGGLNQ MRSGISDMVA VAKLMNASLV LPMLDHKSFW TDPSEFKDIF DWQHFGKSLE
201: DDIEVLESLP PSVANIKPFV KAPVSWSKAS YYSRDILKIL KRRRVLEFTH TDSRLANNGI PDSIQKLRCH AMYEAIRFTE KIEQLGTKLV NRLKENGEPY
301: IALHLRYEKD MLAFTGCNHN LTEKEAEDLQ KLRYKTKHWK EKRINGTERR VLGLCPMTPR EAAIFLEAME YPSNTKICIV AGDTFGKNGL KALQERYPKV
401: YYHSNLATEE ELKPFMQRHN QLAALDYILA LHADVFLYTY DGNMAKAVRG HRLFQGFWKT INPDKQNFVR LIDEMDNKKL SWKEFASQVR LLHVNRTGAP
501: NVRAAANSPK QEENFYANPF PGCICLR

Best Arabidopsis Sequence Match ( AT3G54100.1 )
(BLAST)

001: MSVVGAINPV PIAPTTRRRV GDSLDVISER PSNSSDYCNT INQPIVGSTD LDGGDATGQD SSPSSESSAS STGSHYHHDH YHRFYSHPVI RYLLLRKFWI
101: PFYGGASTVV IGQGFRSGRN VGRRILGLLM LLVVASVFLR VYLMGGVRVV DHARLKEFVV VRTLRDDWSM AQREVAENQA SSQPMRVLEK LPIPEIWQKP
201: ESGNYRQCVT RPKNYTRLQR QTNGYLVVHA NGGLNQMRTG ICDMVAVAKI MNATLVLPLL DHESFWTDPS TFKDIFDWRN FMNVLKHDVD IVEYLPPQYA
301: AMKPLLKAPV SWSKASYYRS EMLPLLKRHK VLKFTLTDSR LANNGLPPSI QRLRCRANYQ ALLYTKEIED LGKILVNRLR NNTEPYIALH LRYEKDMLAF
401: TGCNHNLTTE EAEELRIMRY SVKHWKEKEI DSRERRIQGG CPMSPREAAI FLKAMGYPSS TTVYIVAGEI YGSESMDAFR AEYPNVFSHS TLATEEELEP
501: FSQYQNRLAA LDYIVALESD VFVYTYDGNM AKAVQGHRKF EGFRKSINPD RLNFVRLIDH FDEGIISWEE FSSEVKRLNR DRIGAAYGRL PAALPRLEEN
601: FYANPQPDCI CNKSHPEQLR KQSSLRTDSK SWKKSALR

Arabidopsis Description

OFUT28O-fucosyltransferase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9M393]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.