Factsheet for VIT_13s0019g03250.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
golgi 2
plastid 1
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0451900-01	Rice	cytosol	57.77	62.86
OQU87869	Sorghum	mitochondrion	57.55	56.08
KRH73118	Soybean	mitochondrion	61.93	54.01
KRH15012	Soybean	cytosol	61.27	53.44
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	59.3	51.42
PGSC0003DMT400036338	Potato	cytosol, golgi, mitochondrion	60.18	51.4
VIT_08s0007g01650.t01	Wine grape	plastid	66.3	49.03
TraesCS3B01G397600.1	Wheat	plastid	58.21	48.36
TraesCS3D01G358900.2	Wheat	plastid	57.99	48.01
TraesCS3A01G365800.1	Wheat	plastid	57.99	47.66
HORVU1Hr1G073150.1	Barley	plastid	59.52	45.41
Zm00001d012362_P001	Maize	plastid	53.83	45.14
TraesCS1B01G288800.1	Wheat	plastid	58.86	44.54
Zm00001d038263_P001	Maize	plastid	55.8	44.5
GSMUA_Achr5P28820_001	Banana	plastid	51.2	44.32
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	56.24	44.23
TraesCS1A01G279800.1	Wheat	plastid	58.64	44.08
Zm00001d010112_P001	Maize	cytosol, plastid	54.92	43.43
KXG22127	Sorghum	plastid	57.77	43.21
TraesCS1D01G279000.1	Wheat	plastid	53.17	42.63
VIT_11s0016g01190.t01	Wine grape	cytosol, plastid	57.99	41.8
Os01t0851100-02	Rice	plastid	38.51	41.12
VIT_04s0044g01200.t01	Wine grape	endoplasmic reticulum, golgi	44.86	41.08
VIT_18s0001g06390.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	46.39	39.55
VIT_14s0083g00940.t01	Wine grape	cytosol, vacuole	43.33	38.08
VIT_17s0000g04810.t01	Wine grape	golgi	41.58	36.97
VIT_03s0038g03240.t01	Wine grape	mitochondrion	36.98	28.55
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	35.23	28.1
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	35.01	27.97

Protein Annotations

EntrezGene:100246252	wikigene:100246252	MapMan:35.1	ProteinID:CBI31549	ProteinID:CBI31549.3	UniProt:D7TMI2
EMBL:FN595998	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	EntrezGene:LOC100246252	wikigene:LOC100246252	PFAM:PF10250
PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	UniParc:UPI0001BE3CA8	ArrayExpress:VIT_13s0019g03250	EnsemblPlantsGene:VIT_13s0019g03250
EnsemblPlants:VIT_13s0019g03250.t01	RefSeq:XP_003633455	RefSeq:XP_003633455.1	:	:	:

Description

No Description!

Coordinates

chr13:-:4306929..4308828

Molecular Weight (calculated)

52192.9 Da

IEP (calculated)

7.400

GRAVY (calculated)

-0.501

Length

457 amino acids

Sequence
(BLAST)

001: MDFYCCVVFA SHFSGDGDPT FQSVPATDHD QNPDVWTKPN SGDYYKCINR PFNENRSDAV MNGYILIHAN GGLNQMRTGI SDMVAIAKIM NATLVYPSLD
101: HNSFWTDSSD FKDIFNWNHF QEVLKDDIEI VESLPPEYAA VKPLQKPPVS WSKASYYKET IVSLLKKHKV IQFTHSDSRL ANNYLSKSIQ RLRCRAMYDA
201: LRFTDTIENL AMKLVDRLRT DNKPYIALHL RYEKDMLAFT GCTHNLTAED AEELKVMRHN VKHWKEKDID GEARRLQGGC PITPREAAVF LEAMGFPSDT
301: QIYIVAGKIY GKNGVSAIQS KYPNVLSHSN LATEEELALL KNRQNQLAAL DYLVAVESDV FVYTYDGNMA KAVQGHRRFE GFRKTINPDT RNFVRLIDKW
401: DNGTLSWEKF SSKVRFLHAN RTGAPYHRMP GESPKQEENF YANPLPGCIC NKQEGLL

Best Arabidopsis Sequence Match ( AT2G37980.1 )
(BLAST)

001: MSAAGASPLA VAPITAPTTT TRRRVGDSLE TTSERPSISS DYCNTNTVNI AISPDIDDGE TGLQGGACSS PSSIGSSSSG SHYHHDHHYH HHPTIRYFLL
101: RKLRLPFLFD GVGSTAVVGQ GWWLCSGRNV GRRILGLLMI FVVVSLFLRV SLMSGRVVDH AHRRDLNELV VMRALHEDWS MAQRAMTENV VIEKLPIPEI
201: WQKPESGNYR QCASRPKNRS RLRRKTNGYL LVHANGGLNQ MRTGICDMVA AAKIMNATLV LPLLDHESFW TDPSTFKDIF DWRHFMNVLK DDVDIVEYLP
301: PRYAAMRPLL KAPVSWSKAS YYRSEMLPLL KKHKVIKFTH TDSRLANNGL PPSIQRLRCR ANYQALGYSK EIEDFGKVLV NRLRNNSEPF IALHLRYEKD
401: MLAFTGCSHN LTAGEAEELR IMRYNVKHWK EKEIDSRERR IQGGCPMSPR EAAIFLKAMG YPSSTTVYIV AGEIYGGNSM DAFREEYPNV FAHSYLATEE
501: ELEPFKPYQN RLAALDYIVA LESDVFVYTY DGNMAKAVQG HRRFEGFKKT INPDRLNFVR LIDHLDEGVM SWDEFSSEVK RLHNNRIGAP YARLPGEFPR
601: LEENFYANPQ PDCICNKSQP EQLLKSRESD RWRKSASR

Arabidopsis Description

OFUT19O-fucosyltransferase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH89]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.